Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq91 100 2e-16 >seq91 Length=2005964 Score = 100 bits (110), Expect = 2e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 882477 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 882418 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 882417 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTC-GGGGG 882359 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || | || | ||| | ||||| || || | Sbjct 882358 GATACCCTCCTTGTCTTGAATCTT-GGTCTTGACGTTGTCAATCGTGTCCGACGACTCGA 882300 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||||||| || || || | ||| || |||||||||||||| Sbjct 882299 CCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 882251 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 618547 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 618488 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 618487 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 618428 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || | | || | ||| | ||||| ||||| | Sbjct 618427 AATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGA 618369 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| ||||| || || || || || || |||||||| |||||| Sbjct 618368 CCTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 618319 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 618775 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 618716 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 618715 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 618656 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || | | || | ||| | || || ||||| | Sbjct 618655 AATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 618597 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || || || || |||||||| |||||| Sbjct 618596 CCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 618547 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 619231 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619172 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 619171 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619112 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| |||||| | | || | ||| | || || ||||| | Sbjct 619111 AATGCCCTCCTTGTCCTGAATTTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 619053 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| ||||| || || || | || || |||||||| |||||| Sbjct 619052 CCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 619003 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 619459 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619400 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 619399 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619340 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || | | || | ||| | || || ||||| | Sbjct 619339 AATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 619281 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || || || || |||||||| |||||| Sbjct 619280 CCTCGAGGGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619231 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 619915 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619856 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 619855 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619796 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || | | || | ||| | || || ||||| | Sbjct 619795 AATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 619737 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || || || || |||||||| |||||| Sbjct 619736 CCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619687 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 620143 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620084 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 620083 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620024 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || | | || | ||| | || || ||||| | Sbjct 620023 AATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 619965 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || || || || |||||||| |||||| Sbjct 619964 CCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619915 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 620599 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620540 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 620539 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620480 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || | | || | ||| | || || ||||| | Sbjct 620479 AATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACGTTGTCGATCGTATCCGAGGATTCGA 620421 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || || || || |||||||| |||||| Sbjct 620420 CCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 620371 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 619003 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 618944 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 618943 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 618884 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || | | || | ||| | ||||| ||||| | Sbjct 618883 AATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGA 618825 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| ||||| || || || | || || |||||||| |||||| Sbjct 618824 CCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 618775 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 619687 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619628 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 619627 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619568 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || | | || | ||| | ||||| ||||| | Sbjct 619567 AATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGA 619509 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| ||||| || || || | || || |||||||| |||||| Sbjct 619508 CCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 619459 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | || | |||||| || || || ||| || || ||||||||||||| Sbjct 620371 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620312 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | || || || || || ||||| |||||||| || | || Sbjct 620311 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620252 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || | | || | ||| | ||||| ||||| | Sbjct 620251 AATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGA 620193 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| ||||| || || || | || || |||||||| |||||| Sbjct 620192 CCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 620143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703098632000