Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq119 206 4e-47 >seq119 Length=1057158 Score = 206 bits (228), Expect = 4e-47 Identities = 201/259 (78%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 |||| ||||||||||| ||||| ||||| | ||||||| |||||| || || ||| | Sbjct 672401 CGCCGACGCTCTTTAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCA 672460 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||||| ||||||||| || |||||||| |||||||||||| ||||||||||| | Sbjct 672461 CGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCGCTCATTT 672520 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 ||||| | ||||| || |||||||| | ||||| | ||||| | ||| ||||| Sbjct 672521 CCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGGCTCCTACA 672580 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | || || || |||||| | || |||||| | || |||||||| || || | ||| ||| Sbjct 672581 TCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCTACAACAACA 672640 Query 260163 CGGCGCGCTACGTCGACCA 260181 | ||||||||||||||||| Sbjct 672641 CCGCGCGCTACGTCGACCA 672659 Score = 116 bits (128), Expect = 5e-20 Identities = 301/462 (65%), Gaps = 18/462 (4%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| |||||| || ||||| || |||||| || ||||||||||| ||| || Sbjct 672661 GGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACATC 672720 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | |||||||| |||||||||||||| |||| ||| |||| || Sbjct 672721 TTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAA-GGAG-----GAAGTCCGCGCTCGT 672774 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| | | || |||| ||| || |||||| || | | | ||| | | Sbjct 672775 GATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTTATGGAGCGTGTCGAGGCCGCCGGT 672834 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 || ||| | ||||| ||||| |||| || |||||||| |||||| ||||| || | Sbjct 672835 GAGTGGCCTCTCTTCTGCCCTGCCGAAGCCCCCGGCCTCCACGAAGTCTATGACGAAGAG 672894 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGCCC 262084 || |||||| | ||| | | |||| || ||| Sbjct 672895 TTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAGGACGATC---CCC 672951 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 || | | || | |||| || ||| || ||||| |||| ||||||| || | |||| Sbjct 672952 GCGCAAAAGCTTTGGTACGCGATTCTCCAAGCCCAGGTCGAAACCGGCAACCCGTTCATG 673011 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204 ||||||||||||||| ||| || ||||| ||||||| || ||||| || Sbjct 673012 CTCTACAAGGACGCCGCAAACAAGAAATCTAACCAAAAGAACCTTGG---CACGATCAAG 673068 Query 262205 GCC---AACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCC 262243 || |||||||||||||||||| | ||| ||| ||||| Sbjct 673069 TCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCC 673110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177789498336450