Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq91 134 1e-26 seq90 131 2e-25 seq77 116 4e-21 seq119 82.4 8e-11 >seq91 Length=2005964 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| | ||| ||||| || ||||| || |||||||| ||| | Sbjct 618318 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 618259 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| ||||| || || ||||| |||||||| ||||| || Sbjct 618258 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 618199 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || ||||| || Sbjct 618198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 618139 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || ||||| | || || || ||||||||||| Sbjct 618138 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 618092 >seq90 Length=1083821 Score = 131 bits (144), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | || | ||| || || || |||||||| |||||||||||| | Sbjct 178236 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 178177 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || || || || | ||| ||||| || ||||| Sbjct 178176 AAGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 178117 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || |||||| ||| | ||||||||||| || || Sbjct 178116 ATGCCTTCCTTGTCTTGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACC 178057 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||||| || || || || || || | || || ||||| |||||| Sbjct 178056 TCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGC 178012 >seq77 Length=440787 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || |||||||| |||||||||||| | | |||| | Sbjct 313157 AGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGG 313098 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| || | ||| ||||| || || || || ||||| Sbjct 313097 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCC 313038 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | || |||||||| || || ||||| || Sbjct 313037 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTG 312978 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || || || | || || || || ||||||| Sbjct 312977 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312941 >seq119 Length=1057158 Score = 82.4 bits (90), Expect = 8e-11 Identities = 332/519 (64%), Gaps = 13/519 (3%) Strand=Plus/Plus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| ||||||| | |||| || |||| | | ||||| | | | ||||||| Sbjct 672206 ACGACCGCGATTTTGGTTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGC 672265 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 | ||| ||||| | ||| ||||| || |||||||| |||| || || | | Sbjct 672266 TTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCG 672325 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651 |||| ||||| | ||||| || || |||||| ||||| | | ||||| | Sbjct 672326 GCATCCACGGTCACGACATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGAGCGCT 672385 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCG----CCTCAATTG 7707 | ||||| ||||| ||||| || | ||| ||| || ||||| || || | Sbjct 672386 ACTTTACCCACGCCTCGCCGACGCTCTTTAACGCCGG----AACGCCTCACCCGCAGCTT 672441 Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767 || || ||||| || | || ||| || || || || ||||| ||| ||||||| Sbjct 672442 TCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCT- 672500 Query 7768 CGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGT 7826 | || |||||| |||||||| || ||| || || ||| ||| | | || || | Sbjct 672501 CAAGACTTGCGCGCTCATTTCCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACAT 672560 Query 7827 GCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCAT 7886 ||||| | || | ||||| || ||||| | | | ||| | | ||||| Sbjct 672561 CCGCGCGACTGGCTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCAT 672620 Query 7887 GTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGG 7943 | | || || | ||| ||| | | ||| | || ||||| || || || ||| || Sbjct 672621 GCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGG 672680 Query 7944 CGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACAT 7982 ||| || ||||| | |||||||||||||| ||||| Sbjct 672681 AGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACAT 672719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396978567000