Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq91 134 1e-26
seq90 131 2e-25
seq77 116 4e-21
seq119 82.4 8e-11
>seq91
Length=2005964
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | ||| | ||| ||||| || ||||| || |||||||| ||| |
Sbjct 618318 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 618259
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| || || ||||| |||||||| ||||| ||
Sbjct 618258 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 618199
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || ||||| ||
Sbjct 618198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 618139
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| ||||| || || ||||| | || || || |||||||||||
Sbjct 618138 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 618092
>seq90
Length=1083821
Score = 131 bits (144), Expect = 2e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || | ||| || || || |||||||| |||||||||||| |
Sbjct 178236 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 178177
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| || || || || || | ||| ||||| || |||||
Sbjct 178176 AAGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 178117
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || |||||| ||| | ||||||||||| || ||
Sbjct 178116 ATGCCTTCCTTGTCTTGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACC 178057
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711
||||| || || || || || || | || || ||||| ||||||
Sbjct 178056 TCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGC 178012
>seq77
Length=440787
Score = 116 bits (128), Expect = 4e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || || || |||||||| |||||||||||| | | |||| |
Sbjct 313157 AGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGG 313098
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| ||||| || | ||| ||||| || || || || |||||
Sbjct 313097 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCC 313038
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | || |||||||| || || ||||| ||
Sbjct 313037 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTG 312978
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712
||||| || || || | || || || || |||||||
Sbjct 312977 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312941
>seq119
Length=1057158
Score = 82.4 bits (90), Expect = 8e-11
Identities = 332/519 (64%), Gaps = 13/519 (3%)
Strand=Plus/Plus
Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531
|||| ||||||| | |||| || |||| | | ||||| | | | |||||||
Sbjct 672206 ACGACCGCGATTTTGGTTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGC 672265
Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591
| ||| ||||| | ||| ||||| || |||||||| |||| || || | |
Sbjct 672266 TTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCG 672325
Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651
|||| ||||| | ||||| || || |||||| ||||| | | ||||| |
Sbjct 672326 GCATCCACGGTCACGACATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGAGCGCT 672385
Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCG----CCTCAATTG 7707
| ||||| ||||| ||||| || | ||| ||| || ||||| || || |
Sbjct 672386 ACTTTACCCACGCCTCGCCGACGCTCTTTAACGCCGG----AACGCCTCACCCGCAGCTT 672441
Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767
|| || ||||| || | || ||| || || || || ||||| ||| |||||||
Sbjct 672442 TCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCT- 672500
Query 7768 CGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGT 7826
| || |||||| |||||||| || ||| || || ||| ||| | | || || |
Sbjct 672501 CAAGACTTGCGCGCTCATTTCCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACAT 672560
Query 7827 GCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCAT 7886
||||| | || | ||||| || ||||| | | | ||| | | |||||
Sbjct 672561 CCGCGCGACTGGCTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCAT 672620
Query 7887 GTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGG 7943
| | || || | ||| ||| | | ||| | || ||||| || || || ||| ||
Sbjct 672621 GCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGG 672680
Query 7944 CGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACAT 7982
||| || ||||| | |||||||||||||| |||||
Sbjct 672681 AGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACAT 672719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396978567000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |