Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq119 178 2e-39
seq197 116 5e-21
seq143 107 2e-18
>seq119
Length=1057158
Score = 178 bits (196), Expect = 2e-39
Identities = 606/938 (65%), Gaps = 21/938 (2%)
Strand=Plus/Minus
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || ||||||||||| || || |||||| | | |||||| | || ||
Sbjct 673145 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCG 673086
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || | ||| || ||| ||||| || | |||||||||||| ||||||||
Sbjct 673085 GTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCG 673026
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| | || | || || || ||| | || |||||| || | |
Sbjct 673025 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTGGAGAATCGCGTAC 672966
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|||| | | || || || | | ||||| || |||||| ||||| || | |
Sbjct 672965 CAAAGCTTTTGC-GCGGGGATCGTCCTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 672907
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
||||| ||||| || | | ||| ||| || || || | | | || |||||
Sbjct 672906 CAGGGCGCGGAACTCTTCGTCATAGACTTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAA 672847
Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594
|||| ||| | ||| | |||| || |||| ||| || || || || ||||| || |
Sbjct 672846 GAGAGGCCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGC 672787
Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
| |||||||| | | || | || || | || ||||| || | || |||||
Sbjct 672786 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 672727
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712
||| | ||| || |||||||| ||||| || |||| |||| | ||| |||||
Sbjct 672726 CTCGAAGATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 672670
Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
||| |||| | || |||||||| ||| ||| | || || ||||| |||| ||
Sbjct 672669 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGAT 672610
Query 111769 ACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGG 111826
|| | || | || || || || ||| || ||| | | || | | | ||
Sbjct 672609 GCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAG--CCAGTCGCGCGGATGTTGTGA 672552
Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886
||| || || ||||| || || ||| || || |||| || | | || || |
Sbjct 672551 ATGCTCAAACCGATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCG 672492
Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946
||||| || | || || || ||||| | | || ||||| || || | ||||||
Sbjct 672491 TAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 672432
Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 112006
|| || || || || ||||| || || | ||||| | || | | ||||||
Sbjct 672431 TGAGGCGTTCCGGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATG 672372
Query 112007 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGC 112066
|| ||| | ||||||||| || ||||| | |||||||||||||| ||||| |||
Sbjct 672371 AGGTTGTACGACTCCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGATGGCGACACGC 672312
Query 112067 ATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTC 112126
|||| ||||| ||| ||| ||| || |||| |||| || | | ||| |
Sbjct 672311 ATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGC 672252
Query 112127 TCAAGGGTTTTGAGACCAAA------GTAACCAAAATC 112158
|| || ||||||| ||||| ||||||||||||
Sbjct 672251 TCGAGCGTTTTGAAGCCAAAGTAGTTGTAACCAAAATC 672214
>seq197
Length=690576
Score = 116 bits (128), Expect = 5e-21
Identities = 266/395 (67%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| |||||||| |||| ||| ||| || ||||| ||| | || |||
Sbjct 72552 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 72611
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| || ||| ||||| || | ||| | || ||
Sbjct 72612 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTG 72671
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| |||||| ||| ||| | |||||
Sbjct 72672 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 72731
Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 9392
||| || || ||| | || ||| ||| ||| || || | ||| || | ||| | | ||
Sbjct 72732 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAAATCTCGCGA-GCTGTC 72789
Query 9393 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 9452
| ||| | ||| || |||| | | | | | || ||| | | || || |
Sbjct 72790 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGT 72849
Query 9453 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 9512
|| ||||| ||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 72850 GACTGGGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACC 72909
Query 9513 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 9547
||||||| | ||| | || ||||| || |||||
Sbjct 72910 CCCGACGACTTTGTCCTCGCGACGGGCGAAACCCA 72944
>seq143
Length=1035691
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| || ||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 314710 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 314651
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| |||||| |||||||||| | || | || ||
Sbjct 314650 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAATTGTACGCCTTCTG 314591
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| |||||| ||| |||||||||||
Sbjct 314590 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 314531
Query 9335 CCATGAATCACC 9346
||| || || ||
Sbjct 314530 CCACGAGTCCCC 314519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030233660000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |