Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq119 426 2e-114 seq143 91.5 2e-13 seq79 84.2 2e-11 >seq119 Length=1057158 Score = 426 bits (472), Expect = 2e-114 Identities = 785/1137 (69%), Gaps = 14/1137 (1%) Strand=Plus/Minus Query 78787 GCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCG 78846 || |||||||| | | ||||||||| ||||||||||| |||||||| || | ||| Sbjct 673409 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGCGAATCG 673350 Query 78847 AACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGG 78905 |||| | ||| || |||||| | ||||| || || || || ||||| |||| || Sbjct 673349 AACGGCATCGCCAAGGC-CATGAACGCGTCGGCAAGACCTTGCACTCCGATGCCGATGGG 673291 Query 78906 TCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAAGTTCCGATCGAT 78962 |||||||| | ||| || | ||| ||| | |||| || |||| | ||| Sbjct 673290 GCGGTGGCGGAGGTTAGAATTCTGTGCC---TCGATGACGGGATAGTAGTTAACGTTGAT 673234 Query 78963 GACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAA 79022 || |||||||| ||| | ||||||| | ||||||| ||| || |||||| | Sbjct 673233 GATGCGGTTCAAGTTGAAAGCGACGACCTTGGCGACCTCGTGCAACTTCTTGAAATCGTA 673174 Query 79023 -ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCT 79081 | | | ||| |||||| |||| | | ||| |||| ||||| ||||| || Sbjct 673173 CACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAATTGCAGACGGCGCACT 673115 Query 79082 CGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGA 79141 | || || || ||| ||||| || ||||||| || || |||||||| ||||| | Sbjct 673114 CATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAA 673055 Query 79142 TGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGG 79201 |||||| ||||| |||| ||| ||||||||||||| |||| |||| | |||| Sbjct 673054 GGTTCTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGG 672995 Query 79202 TCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGT 79261 | || ||||| | ||||| ||| ||| | | | || ||| | ||||| Sbjct 672994 TTTCGACCTGGGCTTGGAGAATCGCGTACCAAAGCTTTTGCGCGGGGATCGTCCTCTTGG 672935 Query 79262 ACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGG 79321 ||||||| |||| || | ||| || ||| | || ||||||| ||| Sbjct 672934 CGCGACCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGTCATAGACTTCGT 672875 Query 79322 GCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCT 79381 | ||||| ||| ||| ||||| | || |||| || || | ||| || || Sbjct 672874 GGAGGCCGGGGGCTTCGGCAGGGCAGAAGAGAGGCCACTCACCGGCGGCCTCGACACGCT 672815 Query 79382 CCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGT 79441 |||| ||||| || |||||||| || || |||||| || || || | ||||| | Sbjct 672814 CCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCT 672755 Query 79442 CGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGAT 79501 ||| |||||| || || || || || || | |||||| |||||||||||||| || | Sbjct 672754 TGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGCTCGAGGT 672695 Query 79502 AGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGT 79561 |||| ||||| | || |||||| ||| || |||| |||||| || || ||||||| Sbjct 672694 AGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGT 672635 Query 79562 TGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTG 79621 || | || ||||||||||| |||||||||| | | ||||||||| ||| ||| | Sbjct 672634 TGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGG 672575 Query 79622 TACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 || |||| || ||||| | | | | | ||||| || |||| |||||| ||| Sbjct 672574 AGCCAGTCGCGCGGATGTT-GTGAATGCTCAAACCGATACCACCGGCGGTCTTGGAAATG 672516 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 ||||||| ||||||||| ||||||||||| || ||||| ||||||||||| | |||| Sbjct 672515 AGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACC 672456 Query 79741 AGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCG 79800 ||||| ||| ||| | ||| |||| ||| |||||||| ||||| ||||||| ||| Sbjct 672455 AGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGGCGAGGCG 672396 Query 79801 TGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCG 79860 || || ||| | | | ||| || | ||||| |||| ||||||| || ||||| Sbjct 672395 TGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTCCAAGACGCGCTCGATGTCGTGA 672336 Query 79861 CCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCGCCGACATT 79916 ||||||||||||| ||||| ||||||| | || ||| |||||| ||| |||| || Sbjct 672335 CCGTGGATGCCGATGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCGGCGACCTT 672280 Score = 408 bits (452), Expect = 5e-109 Identities = 772/1122 (69%), Gaps = 14/1122 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| |||||||||| || ||||| || ||| ||| Sbjct 672295 CCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCACGGTCACGACATCGAGCGCGTC 672354 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||| | ||| |||| ||| | || | ||| || ||||| ||||||| || || Sbjct 672355 TTGGAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTT 672414 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| ||||||||| || | |||||||| || Sbjct 672415 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGAT 672474 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||||||||| ||||||||| ||||||| ||| |||||| |||| Sbjct 672475 TCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCGCTCATTTCCAAGACCGCCGGT 672534 Query 19343 GGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||||| | | | | | || ||||| ||| ||| | ||| || ||||| Sbjct 672535 GGTATCGGTTTGAGCATTCAC-AACATCCGCGCGACTGGCTCCTACATCGCCGGTACGAA 672593 Query 19402 CGGAGTAGCCG-ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 ||| || || |||| ||||| || |||||||| |||| ||||||||| || | |||| Sbjct 672594 CGG-CTACTCGAACGGCATCGTTCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACG 672652 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || |||| || ||| ||| || || | ||||| |||||||||||||| ||||||| Sbjct 672653 TCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACG 672712 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | ||| || | || ||||| || || ||| |||||| || | ||||| | ||| || Sbjct 672713 CTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTC 672772 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | || |||||| || | ||||| || || || || |||||| || ||| | || Sbjct 672773 GTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTTATGGAGCGTGTCGAGGCCGCCG 672832 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 || |||| || | ||||| |||| ||| ||||| | ||| ||||| | ||| | Sbjct 672833 GTGAGTGGCCTCTCTTCTGCCCTGCCGAAGCCCCCGGCCTCCACGAAGTCTATGACGAAG 672892 Query 19701 CGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGG 19760 |||| | ||| | || |||| | |||| || ||||| | | ||| | Sbjct 672893 AGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAGGACGATCCCCG 672952 Query 19761 CCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATG 19819 | | | | ||| | |||| | ||| || ||||||||| ||||||| |||| |||| Sbjct 672953 CGCAAAAGCTTTGGTA-CGCGATTCTCCAAGCCCAGGTCGAAACCGGCAACCCGTTCATG 673011 Query 19820 TGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCG 19879 ||||||||||||||| ||| || || || || |||||| | ||| |||||||||| Sbjct 673012 CTCTACAAGGACGCCGCAAACAAGAAATCTAACCAAAAGAACCTTGGCACGATCAAGTCC 673071 Query 19880 TCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAAT 19939 || |||||||| || || ||||| ||| || ||| || ||| ||||| || ||| Sbjct 673072 TCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCAAT 673131 Query 19940 CTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTG 19999 |||| || | |||||| ||| ||||| | | | ||| || || ||| Sbjct 673132 TTGGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGATTTCAAGAAGTTG 673191 Query 20000 TACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA- 20058 ||||||| || ||||||| | || |||| ||| ||||| | |||| || Sbjct 673192 CACGAGGTCGCCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCAACGTTAACTACTAT 673251 Query 20059 CCCG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTC 20116 |||| | ||| ||| | || || || | |||||||| || |||| ||||| || Sbjct 673252 CCCGTCATCGA---GGCACAGAATTCTAACCTCCGCCACCGCCCCATCGGCATCGGAGTG 673308 Query 20117 CAGGGCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCG 20175 || || || ||||||| |||||| || ||| | | ||||| ||| ||||||| Sbjct 673309 CAAGGTCTTGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCG 673367 Query 20176 CGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGC 20217 | ||||||||||| ||||||||| || | |||||||| || Sbjct 673368 CAAGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGC 673409 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||| ||||| || || |||||| ||||| | ||| Sbjct 674227 GGCGCGCGTGCGCAAGTAGTACATGCCAGTCTTCAGTCCTCGCTTCCAGCCGTAAAAGTG 674168 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || ||| | |||| | ||| || || | |||||| ||||| || ||||| Sbjct 674167 CATCGACGTCAGTTGCGCCATCGTGGGGCTCGACAAGTGGATGTTTAGCGATTGCGACTG 674108 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| |||||||| | || |||||| | | |||||||| |||||||| Sbjct 674107 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCA 674048 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 674047 GACGGTCTTGTAGATGGCCTTGAGATC 674021 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| ||| | || |||| ||| |||||| || | Sbjct 674024 CTCAAGGCCATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTCC 674083 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||| |||||||| || ||||| || || | || || || Sbjct 674084 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATCCACTTGTCGAGCCCC 674143 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| | |||| || ||||| | ||||||||| | || || ||||| ||| Sbjct 674144 ACGATGGCGCAACTGACGTCGATGCACTTTTACGGCTGGAAGCGAGGACTGAAGACTGGC 674203 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 674204 ATGTACTACTTGCGCACGCGCGCC 674227 >seq143 Length=1035691 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 |||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 144705 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 144764 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 144765 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 144799 >seq79 Length=1382791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||||| ||| | || || ||||||||||| || || |||||||| ||||| | Sbjct 944360 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGGCTCATGCCTGGCCTCTCT 944419 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 |||||||||||||| |||||||| ||||| || || ||| Sbjct 944420 TTCTCCAACGAGCTCATTTCCCGCGACGAAGGTCTTCAT 944458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523257274000