Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq119 297 2e-75 seq79 138 1e-27 >seq119 Length=1057158 Score = 297 bits (328), Expect = 2e-75 Identities = 528/765 (69%), Gaps = 4/765 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| |||||| | || ||||||||| ||||| | ||| ||| ||| ||||| Sbjct 672308 TCATGCGTGTCGCCATCGGCATCCACGGTCACGACATCGAGCGCGTCTTGGAGTCGTACA 672367 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | | |||||||| |||||| |||| || || || ||||| || ||| Sbjct 672368 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTTAACGCCGGAACGC 672427 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 |||||| ||| | ||| ||| |||||||| |||||||||| || ||||| || |||| Sbjct 672428 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCA 672487 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||||||| || || | ||| |||||| | |||||||||||| | Sbjct 672488 TCTACGACACGCTCAAGACTTGCGCGCTCATTTCCAAGACCGCCGGTGGTATCGGTTTGA 672547 Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 | | | | ||| |||| |||| ||| | ||| || ||||||||| | | | Sbjct 672548 GCATTCAC-AACATCCGCGCGACTGGCTCCTACATCGCCGGTACGAACGGCTACTCGAAC 672606 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||||| || |||||||| |||| ||||||||| || || |||||| |||| ||||| Sbjct 672607 GGCATCGTTCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 672666 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| || | ||||| ||||||||||||||||||||||| ||||| | ||| Sbjct 672667 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACATCTTCGAG 672726 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671 || || || || || ||| || || | || || | ||| ||||| || || Sbjct 672727 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTT 672786 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| || || ||||| ||| | || ||| | || |||||| || Sbjct 672787 GCGCTCTGGATCCCCGATCTCTTTATGGAGCGTGTCGAGGCCGCCGGTGAGTGGCCTCTC 672846 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 | ||||| ||| |||||||||||| | ||||| | || ||||| || || Sbjct 672847 TTCTGCCCTGCCGAAGCCCCCGGCCTCCACGAAGTCTATGACGAAGAGTTCCGCGCCCTG 672906 Query 53792 TATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 | ||| || |||| | |||| ||| ||||| || | || |||| || | || Sbjct 672907 T-TCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAGGACGATCCCCGCGCAAAAGCTTTG 672965 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910 | | || || ||| | |||||| || || || | |||| |||| ||||||||| | Sbjct 672966 GTACGCGATTCTCCAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGC 673025 Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATC 53955 | ||| |||| ||||| |||||| | ||| ||||| || Sbjct 673026 CGCAAACAAGAAATCTAACCAAAAGAACCTTGGCACGATCAAGTC 673070 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||||||| || ||| ||| || |||||||| | || |||| | || ||| || Sbjct 674023 TCTCAAGGCCATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTC 674082 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 || || || ||||| | ||| |||||||| || || || |||||| | || || || Sbjct 674083 CGCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATCCACTTGTCGAGCCC 674142 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | |||| | ||| ||||||||||||||||| |||||| ||||| ||||| || Sbjct 674143 CACGATGGCGCAACTGACGTCGATGCACTTTTACGGCTGGAAGCGAGGACTGAAGACTGG 674202 Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930 |||||||| |||| || |||||| Sbjct 674203 CATGTACTACTTGCGCACGCGCGCC 674227 >seq79 Length=1382791 Score = 138 bits (152), Expect = 1e-27 Identities = 307/455 (67%), Gaps = 8/455 (2%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| || || || ||||| | ||| ||||||| | ||| || | || ||| ||| Sbjct 732264 ATCCCGTTCCAATACCCTCCGAACCATTGACCAAAGCCATGGGGATGATGGGGATGTACC 732323 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 | |||||| | |||||| ||||| | | ||||| | ||| | ||||| | Sbjct 732324 AAGACGGCTCGATGCTTTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 732383 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049 ||| || | | || || || ||| | | ||| |||||||||||| | |||| | Sbjct 732384 GATGAAAGACGCTACGCGTGAT-GGA-TGATACGTTCGTGAAGATGTAAC--GAGCCGAA 732439 Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109 ||||| || || |||||| ||| || || ||||| || || || ||||| | |||| Sbjct 732440 GCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAATTGACCGTTCGGGTCGAGAACGTTG 732499 Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169 |||||||||| || ||||| | || |||| | || ||||| |||| |||| | Sbjct 732500 AGGTTGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATT 732559 Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229 |||||||| || ||||||| ||||| |||| ||| || |||| || | ||||| || Sbjct 732560 TCACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATC 732619 Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289 || |||||| || ||||| || || | | |||||||| || ||||| || Sbjct 732620 TCTTGCGTCAGCTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAAC 732679 Query 152290 CCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 || || | || ||||| |||||| | |||| Sbjct 732680 CCATCAATGACAGAGGGAATAGAACGCACGTTGTC 732714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214460955000