Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq119 297 2e-75
seq79 138 1e-27
>seq119
Length=1057158
Score = 297 bits (328), Expect = 2e-75
Identities = 528/765 (69%), Gaps = 4/765 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | || ||||||||| ||||| | ||| ||| ||| |||||
Sbjct 672308 TCATGCGTGTCGCCATCGGCATCCACGGTCACGACATCGAGCGCGTCTTGGAGTCGTACA 672367
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | | |||||||| |||||| |||| || || || ||||| || |||
Sbjct 672368 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTTAACGCCGGAACGC 672427
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||||| ||| | ||| ||| |||||||| |||||||||| || ||||| || ||||
Sbjct 672428 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCA 672487
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| || || | ||| |||||| | |||||||||||| |
Sbjct 672488 TCTACGACACGCTCAAGACTTGCGCGCTCATTTCCAAGACCGCCGGTGGTATCGGTTTGA 672547
Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
| | | | ||| |||| |||| ||| | ||| || ||||||||| | | |
Sbjct 672548 GCATTCAC-AACATCCGCGCGACTGGCTCCTACATCGCCGGTACGAACGGCTACTCGAAC 672606
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| ||||| || |||||||| |||| ||||||||| || || |||||| |||| |||||
Sbjct 672607 GGCATCGTTCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 672666
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||||| || | ||||| ||||||||||||||||||||||| ||||| | |||
Sbjct 672667 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACATCTTCGAG 672726
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671
|| || || || || ||| || || | || || | ||| ||||| || ||
Sbjct 672727 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTT 672786
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
|| || ||||| || || ||||| ||| | || ||| | || |||||| ||
Sbjct 672787 GCGCTCTGGATCCCCGATCTCTTTATGGAGCGTGTCGAGGCCGCCGGTGAGTGGCCTCTC 672846
Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791
| ||||| ||| |||||||||||| | ||||| | || ||||| || ||
Sbjct 672847 TTCTGCCCTGCCGAAGCCCCCGGCCTCCACGAAGTCTATGACGAAGAGTTCCGCGCCCTG 672906
Query 53792 TATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850
| ||| || |||| | |||| ||| ||||| || | || |||| || | ||
Sbjct 672907 T-TCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAGGACGATCCCCGCGCAAAAGCTTTG 672965
Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910
| | || || ||| | |||||| || || || | |||| |||| ||||||||| |
Sbjct 672966 GTACGCGATTCTCCAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGC 673025
Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATC 53955
| ||| |||| ||||| |||||| | ||| ||||| ||
Sbjct 673026 CGCAAACAAGAAATCTAACCAAAAGAACCTTGGCACGATCAAGTC 673070
Score = 109 bits (120), Expect = 6e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785
|||||||| || ||| ||| || |||||||| | || |||| | || ||| ||
Sbjct 674023 TCTCAAGGCCATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTC 674082
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| || || ||||| | ||| |||||||| || || || |||||| | || || ||
Sbjct 674083 CGCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATCCACTTGTCGAGCCC 674142
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| |||| | ||| ||||||||||||||||| |||||| ||||| ||||| ||
Sbjct 674143 CACGATGGCGCAACTGACGTCGATGCACTTTTACGGCTGGAAGCGAGGACTGAAGACTGG 674202
Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930
|||||||| |||| || ||||||
Sbjct 674203 CATGTACTACTTGCGCACGCGCGCC 674227
>seq79
Length=1382791
Score = 138 bits (152), Expect = 1e-27
Identities = 307/455 (67%), Gaps = 8/455 (2%)
Strand=Plus/Plus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| || || || ||||| | ||| ||||||| | ||| || | || ||| |||
Sbjct 732264 ATCCCGTTCCAATACCCTCCGAACCATTGACCAAAGCCATGGGGATGATGGGGATGTACC 732323
Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| |||||| | |||||| ||||| | | ||||| | ||| | ||||| |
Sbjct 732324 AAGACGGCTCGATGCTTTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 732383
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049
||| || | | || || || ||| | | ||| |||||||||||| | |||| |
Sbjct 732384 GATGAAAGACGCTACGCGTGAT-GGA-TGATACGTTCGTGAAGATGTAAC--GAGCCGAA 732439
Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109
||||| || || |||||| ||| || || ||||| || || || ||||| | ||||
Sbjct 732440 GCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAATTGACCGTTCGGGTCGAGAACGTTG 732499
Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169
|||||||||| || ||||| | || |||| | || ||||| |||| |||| |
Sbjct 732500 AGGTTGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATT 732559
Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229
|||||||| || ||||||| ||||| |||| ||| || |||| || | ||||| ||
Sbjct 732560 TCACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATC 732619
Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289
|| |||||| || ||||| || || | | |||||||| || ||||| ||
Sbjct 732620 TCTTGCGTCAGCTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAAC 732679
Query 152290 CCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| || | || ||||| |||||| | ||||
Sbjct 732680 CCATCAATGACAGAGGGAATAGAACGCACGTTGTC 732714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214460955000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |