Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq143 86.0 6e-12 >seq143 Length=1035691 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 6895 CCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954 || |||||| || || || ||||||||||| ||||| || ||||| ||||| || ||||| Sbjct 262153 CCTATACTCTGCGCCGAAATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTC 262212 Query 6955 CTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014 |||| | | ||||| |||||||||||| | || || || | | ||||| || Sbjct 262213 TTCCCTATGTCCCAACCCAACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAAT 262272 Query 7015 CTTCACCCCC 7024 ||| |||||| Sbjct 262273 CTTGACCCCC 262282 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380 |||||| ||||| ||||| | | || || || | |||||||||||| ||||| Sbjct 262282 GGGGGTCAAGATTTGGGATGGGAATGGATCGAGACAATTTCTGGACAAGGTTGGGTTGGG 262223 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 | | |||| ||||| || ||||| ||||| || ||||| ||||||||||| || || || Sbjct 262222 ACATAGGGAAGAGGGAGATTTGGGACCGGTTTATGGGTTTCAGTGGAGACATTTCGGCGC 262163 Query 34441 GGAGTATCGG 34450 |||||| || Sbjct 262162 AGAGTATAGG 262153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261139262000