Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq143 152 4e-32 >seq143 Length=1035691 Score = 152 bits (168), Expect = 4e-32 Identities = 199/273 (73%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 27453 CAGCTGATCCACCCCCATCCCCGAG-TAGTCTACCCTCATGTCCGTGTACTCTGCTCCGA 27511 || |||||| |||||| |||||| | || || || | | | | |||||||| |||| Sbjct 262111 CAACTGATCGACCCCC-TCCCCGCGATAATCATCCTTGGCGGTCCTATACTCTGCGCCGA 262169 Query 27512 AATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 27571 |||| ||||| || ||||| || |||||||||| |||||||||||||| || | || | Sbjct 262170 AATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTCTTCCCTATGTCCCAACC 262229 Query 27572 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGG 27631 | |||||||| ||| | ||| || || || | ||||| ||||| |||||||| | || Sbjct 262230 CAACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTTGG 262289 Query 27632 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 27691 | | |||||| | || || |||| |||||||| || || ||||| | || | Sbjct 262290 ATAATAATTTGGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACCTC 262349 Query 27692 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 | ||||||| |||||||||| | ||||||| Sbjct 262350 GCGTAAAGACCTTCTTGGTCGTCAAAAGGGGAA 262382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506186741975