Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq119 96.9 5e-15
>seq119
Length=1057158
Score = 96.9 bits (106), Expect = 5e-15
Identities = 293/453 (65%), Gaps = 0/453 (0%)
Strand=Plus/Minus
Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043
||| ||||| | ||| || || | |||||||||||| || ||||| || |||| ||
Sbjct 672840 CCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAA 672781
Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103
||||| || | | ||| || || || ||||| ||| || || ||||| |
Sbjct 672780 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 672721
Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCC 78163
|| |||| ||||| || || || || || || | |||| || || || || || ||
Sbjct 672720 GATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661
Query 78164 CTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGA 78223
|| || | || | |||||||| || || || | | ||| |||| || ||||| ||
Sbjct 672660 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGA 672601
Query 78224 TGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCC 78283
|| || || || | || || ||| | ||||| || || |||| | ||
Sbjct 672600 GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACC 672541
Query 78284 TATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTC 78343
|| || || || |||| || || || |||||| || | || |||||||| || ||
Sbjct 672540 GATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTC 672481
Query 78344 TATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 78403
|| || ||| |||| | | || |||||| || | || | ||| |||||
Sbjct 672480 AATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCC 672421
Query 78404 TGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436
|| ||||| | ||||| || || || |||||
Sbjct 672420 GGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAA 672388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666846244000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |