Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq90 168 2e-36
seq77 154 4e-32
seq91 145 2e-29
>seq90
Length=1083821
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || ||||||||||||||||| || || |||
Sbjct 178013 CAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 178072
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||||||| ||||| || ||||| ||||| ||||| || |||||||||
Sbjct 178073 ACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 178132
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| |||||||| ||||| | || | ||||| || ||| ||
Sbjct 178133 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 178192
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 178193 CAAAAGGAGTCGACCCTCCA-CTTG 178216
>seq77
Length=440787
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || ||||| || || || |||||||||||||| || || ||
Sbjct 312943 CAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAT 313002
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| ||||||||||| || |||||||||
Sbjct 313003 ACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGCAA 313062
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| ||||| | || | ||||| || ||| ||
Sbjct 313063 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 313122
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 313123 CAAAAGGAGTCGACCCTCCA-CTTG 313146
>seq91
Length=2005964
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || ||||||||||||||||| ||| ||| ||
Sbjct 619235 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACCCTCGAGGTCGAATCCTCGGAT 619294
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 619295 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619354
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 619355 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619414
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 619415 CAGAAGGAGTCGACGCTGCA-CTTG 619438
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || |||||||| |||||||| ||| ||| ||
Sbjct 618551 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 618610
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 618611 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 618670
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 618671 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 618730
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 618731 CAGAAGGAGTCGACGCTGCA-CTTG 618754
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || |||||||| |||||||| ||| ||| ||
Sbjct 619691 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 619750
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 619751 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619810
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 619811 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619870
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 619871 CAGAAGGAGTCGACGCTGCA-CTTG 619894
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || |||||||| |||||||| ||| ||| ||
Sbjct 619919 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 619978
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 619979 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 620038
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 620039 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 620098
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 620099 CAGAAGGAGTCGACGCTGCA-CTTG 620122
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || |||||||| |||||||| ||| ||| ||
Sbjct 620375 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 620434
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||||||
Sbjct 620435 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 620494
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 620495 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 620554
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 620555 CAGAAGGAGTCGACGCTGCA-CTTG 620578
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || ||||| || |||||||| ||| ||| ||
Sbjct 619007 CAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCGGAT 619066
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || ||||||||||| || || || || || ||||||||
Sbjct 619067 ACGATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619126
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || ||||| || || || | || || |||||||| ||| ||
Sbjct 619127 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619186
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 619187 CAGAAGGAGTCGACGCTGCA-CTTG 619210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203727729868650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |