Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq90 168 2e-36 seq77 154 4e-32 seq91 145 2e-29 >seq90 Length=1083821 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || ||||||||||||||||| || || ||| Sbjct 178013 CAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 178072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 178073 ACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 178132 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| ||||| | || | ||||| || ||| || Sbjct 178133 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 178192 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 178193 CAAAAGGAGTCGACCCTCCA-CTTG 178216 >seq77 Length=440787 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || || |||||||||||||| || || || Sbjct 312943 CAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAT 313002 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| ||||||||||| || ||||||||| Sbjct 313003 ACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGCAA 313062 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || | ||||| || ||| || Sbjct 313063 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 313122 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 313123 CAAAAGGAGTCGACCCTCCA-CTTG 313146 >seq91 Length=2005964 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || ||||||||||||||||| ||| ||| || Sbjct 619235 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACCCTCGAGGTCGAATCCTCGGAT 619294 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 619295 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619354 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 619355 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619414 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 619415 CAGAAGGAGTCGACGCTGCA-CTTG 619438 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || |||||||| |||||||| ||| ||| || Sbjct 618551 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 618610 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 618611 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 618670 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 618671 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 618730 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 618731 CAGAAGGAGTCGACGCTGCA-CTTG 618754 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || |||||||| |||||||| ||| ||| || Sbjct 619691 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 619750 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 619751 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619810 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 619811 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619870 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 619871 CAGAAGGAGTCGACGCTGCA-CTTG 619894 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || |||||||| |||||||| ||| ||| || Sbjct 619919 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 619978 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 619979 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 620038 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 620039 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 620098 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 620099 CAGAAGGAGTCGACGCTGCA-CTTG 620122 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || |||||||| |||||||| ||| ||| || Sbjct 620375 CAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCGGAT 620434 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 620435 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 620494 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 620495 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 620554 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 620555 CAGAAGGAGTCGACGCTGCA-CTTG 620578 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || ||||| || |||||||| ||| ||| || Sbjct 619007 CAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCGGAT 619066 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| || ||||||||||| || || || || || |||||||| Sbjct 619067 ACGATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 619126 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || | || || |||||||| ||| || Sbjct 619127 CGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAACATC 619186 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 619187 CAGAAGGAGTCGACGCTGCA-CTTG 619210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203727729868650