Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq26 86.0 1e-11
seq24 86.0 1e-11
>seq26
Length=2192579
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 319012 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 319071
|||||||||||||| ||||| | | ||| | || || || |||||||||||||||||
Sbjct 1907147 TAACGCCATTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 1907088
Query 319072 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 319113
|| || || |||||||| || | ||||| || || ||||||
Sbjct 1907087 GCGTGTTGGGCCACGTACGCTACACGCAAGTTGGGGTGCTTC 1907046
>seq24
Length=1584903
Score = 86.0 bits (94), Expect = 1e-11
Identities = 177/260 (68%), Gaps = 10/260 (4%)
Strand=Plus/Minus
Query 281768 GTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGG--CAACAACCAGTTAATG 281825
|||||||||||| |||| | || ||||| ||||| | ||| | | || ||| | |
Sbjct 561779 GTCTTTACCACCTTGCAAACGCGTACCAAATTGACCGTTCGGGTCGAGAA--TGTTGAGG 561722
Query 281826 TTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCA 281885
|| ||| ||| || | | || ||||| || ||| || || || | | |||
Sbjct 561721 TTGTTGGACCCTACAAACTGTTGCGCCAGACCGATGATGGTGCCTTGCAAACTCATTTCA 561662
Query 281886 CCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTCT 281945
||||| || || || ||| ||||| || ||||| | || ||| | ||||| | |||
Sbjct 561661 CCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCT 561602
Query 281946 GATGTCAAGTTGCGTTTGAAAGCGCAA---TATAATACTTTTCGTTGAGAAGGCTTGAAA 282002
||||| ||||| ||||| |||| | || || || |||||| ||||||||
Sbjct 561601 TGCGTCAATTTGCGCTTGAA---GCAACCGAACAAGACCTTGCGTTGACCCGGCTTGAAC 561545
Query 282003 CCATCAACGACAGACGGAAT 282022
||||||| |||||| |||||
Sbjct 561544 CCATCAATGACAGAGGGAAT 561525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823430758460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |