Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq25 100 2e-16 >seq25 Length=1823320 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1294082 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294023 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1294022 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1293963 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1293962 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1293903 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1293902 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1293868 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1294310 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294251 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1294250 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294191 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1294190 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294131 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1294130 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1294096 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1294766 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294707 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1294706 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294647 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1294646 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294587 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1294586 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1294552 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| || || || ||| || || | Sbjct 1296134 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1296075 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || || || || || || | ||| ||| ||| Sbjct 1296074 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1296015 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | ||||| ||||| Sbjct 1296014 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295955 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||||||||| || || || ||| ||||||| || Sbjct 1295954 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTTGCG 1295920 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || |||| ||||| || || || ||| || || | Sbjct 1296362 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1296303 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| ||||| || || || || | ||| ||| ||| Sbjct 1296302 GACACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1296243 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||||||||| ||| | || ||| | || | || |||||||| Sbjct 1296242 CAACGTCTTATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACGCTCGCGGATTACAAC 1296183 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||||||||| || || || ||| ||||| Sbjct 1296182 ATTCAAAAGGAGTCGACCCTCCACTTGGTG 1296153 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || |||| || ||||| ||||| ||||| || ||| || | || Sbjct 1053859 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCA 1053800 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | ||||| || ||| || || || || | ||| ||| ||| Sbjct 1053799 GACACGATTGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 1053740 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||||||||| ||| | || ||| | || | || |||||||| Sbjct 1053739 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACGCTCGCAGATTACAAC 1053680 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || || ||||| || || || ||| ||||| Sbjct 1053679 ATCCAGAAGGAGTCGACCCTCCACTTGGTG 1053650 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1293854 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1293795 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1293794 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1293735 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1293734 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1293675 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1293674 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1293640 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1294538 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294479 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1294478 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294419 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1294418 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294359 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1294358 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1294324 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1294994 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294935 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1294934 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294875 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1294874 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294815 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1294814 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1294780 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1295222 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1295163 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1295162 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1295103 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1295102 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295043 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1295042 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1295008 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1295450 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1295391 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1295390 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1295331 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1295330 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295271 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1295270 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1295236 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1295678 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1295619 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1295618 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1295559 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1295558 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295499 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1295498 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1295464 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || ||||| ||||| || || || ||| || || | Sbjct 1295906 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1295847 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | || ||||| || ||| || || || || | ||| ||| ||| Sbjct 1295846 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1295787 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || ||||||||||| || || | || ||| | || | ||||| ||||| Sbjct 1295786 CAACGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295727 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||| || || || ||| ||||||| || Sbjct 1295726 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 1295692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796589723388