Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq25 159 7e-34 >seq25 Length=1823320 Score = 159 bits (176), Expect = 7e-34 Identities = 467/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| ||||| | Sbjct 20814 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGATCGCGATTTCGGC 20873 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| ||||| ||| |||||| | || || || |||||| Sbjct 20874 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCGTATTTGCTTCGCATCGACGGCAAG 20933 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| |||||| || |||||| | ||||| || || ||||| || ||| | ||| Sbjct 20934 GTCGCCGAACGACCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 20993 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 20994 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCGGAGCGCTACTTTACCCACGCCTCG 21053 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 ||||| |||||||||||||| || | || || ||||| |||||||| || | | Sbjct 21054 CCGACACTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTGCTTCCTGGTCAC 21112 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | || || || |||| ||||| || |||||||| | ||||| ||| || Sbjct 21113 GATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCTCAT 21169 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| || || |||||| | | || ||||||||| |||| || || || Sbjct 21170 CTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTA 21229 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || || || || | | || ||||| ||| | || || || | Sbjct 21230 CATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAA 21289 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 ||||| | | | || |||| | || | || || | ||||| || || | Sbjct 21290 TACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 21349 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || ||||||||||| | || |||||||||||| | |||||| ||||||| || Sbjct 21350 CGAGCCTTGGCACGCCGACGTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 21409 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| || |||| | |||||| || Sbjct 21410 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCG 21469 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 21470 AGTCGAGGCCGCCGGCGACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTC 21524 Score = 86.0 bits (94), Expect = 1e-11 Identities = 126/177 (71%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 115380 GTCAACTTTCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGT 115439 |||||| | ||| |||| || || || |||| || |||||||| |||||||||||| | Sbjct 1450721 GTCAACCT-CGAGTACCTCAAGATGGCGCATCGACTTTGAATCGGCTCGATGATTTTGTT 1450779 Query 115440 GGAGTTGTTGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCG 115499 | | |||||| | | | ||| || || ||| | ||| | | ||||| ||| || Sbjct 1450780 GCTCTGGTTGCACGCAAAGGCGAAGCGGGTGGTGTTGGAGAAGATTTCCATCGTCCTGCG 1450839 Query 115500 CAGCGCCTGGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 ||||| || || || || ||||||||||| || |||||||| | ||| | ||| Sbjct 1450840 GAGCGCTTGCTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 1450896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765822179456