Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 3e-11 >seq25 Length=1823320 Score = 84.2 bits (92), Expect = 3e-11 Identities = 410/646 (63%), Gaps = 10/646 (2%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || ||| | ||| ||||| | ||| |||||||| || ||||| || || | || Sbjct 21491 CCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAA 21432 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 21431 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAA 21372 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | || | ||||| || || | ||| || || | |||| || || ||||| || || Sbjct 21371 GACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 21312 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||| | ||||| || || || || | | ||| || | || ||||| || Sbjct 21311 TTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 21252 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 || || || |||| ||| || || | || || || || || | ||| Sbjct 21251 GTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 21192 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTT 63606 || || || || | || ||||| | ||||| ||| || | |||||| |||||||||| Sbjct 21191 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 21133 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | || |||||| |||| | | || || || || | || | ||| |||| Sbjct 21132 CGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTC 21073 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | || || || | || || || ||||| ||||| | || || | || ||||||| Sbjct 21072 CGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACG 21013 Query 63727 TCT-CAATAGCTGAGTCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAAC 63782 || ||| | | || || || ||| || || || || ||||| ||||| | | Sbjct 21012 ACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGACGCGCATGAGC 20957 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 ||||| || |||| ||| | | ||| || || | ||| || || || | Sbjct 20956 ATGTGTTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGC 20897 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888 || || || ||||| |||||||| || || || ||||| |||| Sbjct 20896 GTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGATCGTAGATAA 20851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817269345760