Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq25 120 5e-22 >seq25 Length=1823320 Score = 120 bits (132), Expect = 5e-22 Identities = 348/531 (66%), Gaps = 6/531 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || |||||| || | | ||| | || || |||||| | | ||||| |||| | || Sbjct 21240 ACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAA--CAATACCGCGC 21297 Query 96867 --TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||| || || ||||| || || || || || | || ||||| | || |||| Sbjct 21298 GCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCTT 21357 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| ||||| ||||| || | || | ||||| ||| ||| || || | | Sbjct 21358 GGCACGCCGACGTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 21417 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | || | || | || | ||| |||||| | || ||| | |||||| |||| ||| | | Sbjct 21418 GCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGG 21477 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 || ||| ||||| ||| | ||||||| | | ||||| || ||| | | Sbjct 21478 CCGCCGGCGACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATG 21537 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGA 97163 |||||||||| ||| || | | ||||| | |||||||| | | |||||| Sbjct 21538 GCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 21597 Query 97164 GTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223 || || | | | || ||| | || || | ||| ||||| || || || | ||| Sbjct 21598 -TCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCG 21656 Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283 | ||| ||||||||||| ||| || || |||||| || | ||||| ||| Sbjct 21657 TTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATC 21716 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||| || || |||||||| ||||| | |||||| || | ||||||||| Sbjct 21717 AAGTCGTCGAACCTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAG 21767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058810943920