Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq25 84.2 5e-11 >seq25 Length=1823320 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1293430 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1293489 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1293490 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1293549 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1293550 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1293608 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1293609 CTTGACGAAGATTTGCAT 1293626 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1293658 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1293717 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1293718 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1293777 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1293778 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1293836 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1293837 CTTGACGAAGATTTGCAT 1293854 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1293886 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1293945 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1293946 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1294005 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1294006 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1294064 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1294065 CTTGACGAAGATTTGCAT 1294082 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1294114 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1294173 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1294174 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1294233 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1294234 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1294292 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1294293 CTTGACGAAGATTTGCAT 1294310 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1294342 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1294401 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1294402 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1294461 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1294462 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1294520 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1294521 CTTGACGAAGATTTGCAT 1294538 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| | || || | || || || ||||| || || Sbjct 1294570 GTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGTTGCTTGCCC 1294629 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1294630 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1294689 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1294690 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1294748 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1294749 CTTGACGAAGATTTGCAT 1294766 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1294798 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1294857 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1294858 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1294917 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1294918 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1294976 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1294977 CTTGACGAAGATTTGCAT 1294994 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1295026 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1295085 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1295086 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1295145 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1295146 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1295204 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1295205 CTTGACGAAGATTTGCAT 1295222 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1295254 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1295313 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1295314 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1295373 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1295374 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1295432 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1295433 CTTGACGAAGATTTGCAT 1295450 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1295482 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1295541 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1295542 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1295601 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1295602 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1295660 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1295661 CTTGACGAAGATTTGCAT 1295678 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | || || || || || ||||| Sbjct 1295710 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTTCCC 1295769 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||||| || || || || || || || ||||||||||| || || Sbjct 1295770 GCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTG 1295829 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || || || ||||| || || | || Sbjct 1295830 ACATTGTCAATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAAGGT 1295888 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 1295889 CTTGACGAAGATTTGCAT 1295906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397780403736