Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq39 113 3e-20 >seq39 Length=984724 Score = 113 bits (124), Expect = 3e-20 Identities = 163/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TACTCTGCTCC 25793 || |||||| |||||| |||| ||| || || | | |||| |||||||| || Sbjct 222285 CAACTGATCGACCCCCTCCCCCTGGTAATCATCCTT---GGCCGTTCTATACTCTGCGCC 222341 Query 25794 GAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAA 25853 || | ||||||||||||||| || ||||| || | || || |||| ||| ||| | || Sbjct 222342 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 222401 Query 25854 GCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTC 25913 || ||| |||| || | ||| || ||||| | ||||| ||||| ||||||||||| Sbjct 222402 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 222461 Query 25914 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 ||| | ||| || | || || |||| |||||||| || || ||| Sbjct 222462 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCC 222510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137425892066