Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq17 95.1 2e-14
>seq17
Length=1685150
Score = 95.1 bits (104), Expect = 2e-14
Identities = 258/393 (66%), Gaps = 4/393 (1%)
Strand=Plus/Plus
Query 193777 ATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTAGGCACTCC 193834
|||| ||| |||| || || || ||| ||| ||||||| ||| || || || ||
Sbjct 61163 ATGTCCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAG--ACCCC 61220
Query 193835 ACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGG 193894
| ||| || || || || || | || || || ||||| || || || |||||||| |
Sbjct 61221 TCAATCCGAGACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGC 61280
Query 193895 TTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCT 193954
| |||||| ||||||| || || ||||| || | | |||| | ||||| |
Sbjct 61281 CTTCTGGATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTT 61340
Query 193955 CTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGG 194014
||||| ||||| || || | | ||| || ||||| || | |||||| | | ||
Sbjct 61341 GTTCAACCACGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGC 61400
Query 194015 TTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAA 194074
| | | ||||||| | || |||| | || || || || || | | || ||
Sbjct 61401 TGTCGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAA 61460
Query 194075 GAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGA 194134
| | |||||||||||||| ||||| || || | |||||| | ||| |||| || ||
Sbjct 61461 GCGTGATTGGGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGA 61520
Query 194135 TGAACCCGATGATTATGTGATTGCTACAGGTGA 194167
||||| || | ||| | || || |||||
Sbjct 61521 CACCCCCGACGACTTTGTCCTCGCGACGGGTGA 61553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807554776033520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |