Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 2e-14 >seq17 Length=1685150 Score = 95.1 bits (104), Expect = 2e-14 Identities = 258/393 (66%), Gaps = 4/393 (1%) Strand=Plus/Plus Query 193777 ATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTAGGCACTCC 193834 |||| ||| |||| || || || ||| ||| ||||||| ||| || || || || Sbjct 61163 ATGTCCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAG--ACCCC 61220 Query 193835 ACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGG 193894 | ||| || || || || || | || || || ||||| || || || |||||||| | Sbjct 61221 TCAATCCGAGACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGC 61280 Query 193895 TTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCT 193954 | |||||| ||||||| || || ||||| || | | |||| | ||||| | Sbjct 61281 CTTCTGGATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTT 61340 Query 193955 CTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGG 194014 ||||| ||||| || || | | ||| || ||||| || | |||||| | | || Sbjct 61341 GTTCAACCACGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGC 61400 Query 194015 TTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAA 194074 | | | ||||||| | || |||| | || || || || || | | || || Sbjct 61401 TGTCGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAA 61460 Query 194075 GAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGA 194134 | | |||||||||||||| ||||| || || | |||||| | ||| |||| || || Sbjct 61461 GCGTGATTGGGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGA 61520 Query 194135 TGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 ||||| || | ||| | || || ||||| Sbjct 61521 CACCCCCGACGACTTTGTCCTCGCGACGGGTGA 61553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554776033520