Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq25 239 1e-57 >seq25 Length=1823320 Score = 239 bits (264), Expect = 1e-57 Identities = 514/766 (67%), Gaps = 2/766 (0%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| |||| ||| | | ||| || ||||| | | | || ||| | || || Sbjct 21039 TTTACCCACGCCTCGCCGACACTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCG 21098 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| ||||| ||||| || |||| ||||| || |||| Sbjct 21099 TGCTTCCTGGTCACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGACG 21158 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||||| || || || || ||| | |||||||| | || || Sbjct 21159 TGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCG 21218 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| |||||| || |||||||| || | || |||||||| || Sbjct 21219 ACCGG-CTCTTACATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 21277 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | ||||||| ||| | ||||||||||| ||||| ||||| || || || Sbjct 21278 TGTCTACAACAATACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTT 21337 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || || ||||||||| || ||||| | |||||||| || || || || || || Sbjct 21338 CGCGATCTACCTCGAGCCTTGGCACGCCGACGTCTTTGAGTTCCTGGACCTTCGCAAGAA 21397 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || |||||| | || || |||||||| |||| ||| || ||| | | || | Sbjct 21398 CCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCT 21457 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 || ||| |||| || ||||| | | ||| | || || ||||| |||| || Sbjct 21458 CTTCATGGAGCGAGTCGAGGCCGCCGGCGACTGGCCCCTGTTCTGCCCCGCCGAAGCCCC 21517 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || || ||| || | || || || | || || | ||| || || ||| ||| Sbjct 21518 CGGCCTCCACGAAGTTTATGGCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGA 21577 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| || ||||| || ||||| || ||||| |||| || || | || | || Sbjct 21578 GGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAGGCCCA 21637 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | | || || || | || | ||| | ||||| || | ||| || || ||||| Sbjct 21638 GGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCA 21697 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 || ||||||| || || || | ||||| || ||||| || || || ||| |||| Sbjct 21698 AAAGAACCTTGGCACGATCAAGTCGTCGAACCTGTGCACCGAAATCATCGAGTACTCCGC 21757 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 || |||||| ||||| || ||| | || ||||||||| | ||| Sbjct 21758 GCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 21803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352898632844