Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq25 89.7 4e-13 >seq25 Length=1823320 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || |||| || |||| |||||| || Sbjct 1294082 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294023 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| ||||| || ||||| || || || ||| Sbjct 1294022 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1293963 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||||||||| |||| | | | || ||| || ||| Sbjct 1293962 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1293903 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| || || || | || || ||||| Sbjct 1293902 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1293871 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || |||| || |||| |||||| || Sbjct 1294310 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294251 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| ||||| || ||||| || || || ||| Sbjct 1294250 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294191 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||||||||| |||| | | | || ||| || ||| Sbjct 1294190 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294131 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| || || || | || || ||||| Sbjct 1294130 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1294099 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || || |||| || |||| |||||| || Sbjct 1294766 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1294707 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| |||||| ||||| || ||||| || || || ||| Sbjct 1294706 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1294647 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||||||||| |||| | | | || ||| || ||| Sbjct 1294646 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1294587 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| || || || | || || ||||| Sbjct 1294586 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1294555 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || |||| || |||| |||||| || Sbjct 1296134 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1296075 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || ||||| || || || ||| Sbjct 1296074 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1296015 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | |||||||||||||| |||| | | | || ||| || ||| Sbjct 1296014 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1295955 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| || || || | || || ||||| Sbjct 1295954 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1295923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935779926510