Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq26 109 1e-18
seq24 100 6e-16
seq37 91.5 3e-13
>seq26
Length=2192579
Score = 109 bits (120), Expect = 1e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229
||| || | || ||||| ||||| ||||| || ||||| ||||| || |||| ||||||
Sbjct 1906960 GGTATCGTCGGCCCCAACGGTGCCGGTAAATCGACCCTGATCAAGCTCTTGACGGGCGAG 1907019
Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289
||| | || || || || |||||| |||||| |||| | || ||||| ||
Sbjct 1907020 ACCGTGCCCGACGAAGGCAAGGTCGAGAAGCACCCCAACTTGCGTGTAGCGTACGTGGCC 1907079
Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349
|| ||||| ||||||||||||||| | ||||| || | ||| | | || ||||| ||
Sbjct 1907080 CAACACGCGTTCCACCACATCGAGGAGCACCTCGAGAAGACGGCGATGCAGTACATCCAA 1907139
Query 280350 TGGCGCTA 280357
||||| ||
Sbjct 1907140 TGGCGTTA 1907147
>seq24
Length=1584903
Score = 100 bits (110), Expect = 6e-16
Identities = 250/380 (66%), Gaps = 0/380 (0%)
Strand=Plus/Plus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
|| || ||| |||||||| | || || |||||| | || | |||||||||||||
Sbjct 561471 GATTTTATCAACAAGGAGTTGATCCTCTTCTCGATGGCCGACAATGTGCGTTCTATTCCC 561530
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
|| | ||||| ||||||| || || ||| || | || | ||||||||
Sbjct 561531 TCTGTCATTGATGGGTTCAAGCCGGGTCAACGCAAGGTCTTGTTCGGTTGCTTCAAGCGC 561590
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
|| || ||||| || ||||||| || || ||||| || |||| || |
Sbjct 561591 AAATTGACGCAAGAGATCAAGGTCGGACAATTGGGCGGTTACGTCGCCGAGCACTCGGCG 561650
Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757
|||||||||||||| |||| |||| || |||| | || |||| || | | |||
Sbjct 561651 TACCATCACGGTGAAATGAGTTTGCAAGGCACCATCATCGGTCTGGCGCAACAGTTTGTA 561710
Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGT 218817
|| |||||| | ||| | || ||| |||||||| |||||| | ||| | |||
Sbjct 561711 GGGTCCAACAACCTCAACATTCTCGACCCGAACGGTCAATTTGGTACGCGTTTGCAAGGT 561770
Query 218818 GGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAG 218877
|| || || ||||| || | || |||||||| || |||| || | |||||
Sbjct 561771 GGTAAAGACGCGGCTTCGGCTCGTTACATCTTTACGAACGTGTCATCCATCACGCGTAGC 561830
Query 218878 GTGTTCAATCAGGCCGATGA 218897
|| ||| ||| || |||||
Sbjct 561831 GTTTTCCATCCCGCTGATGA 561850
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| | ||||||||||| || |||| |||||||||
Sbjct 680037 AGCCCGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAG 679978
Query 142563 CCCCACATCGGGC 142575
|||| ||| ||||
Sbjct 679977 CCCCGCATTGGGC 679965
Score = 89.7 bits (98), Expect = 1e-12
Identities = 189/277 (68%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896
||||| |||||| |||| || ||||| || || |||| || | | ||||| ||
Sbjct 560787 TGCACACTCATCTTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCT 560846
Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956
|| || ||||| || | |||||| ||||||| | || || ||||| |||||||||||
Sbjct 560847 GTCGTCGGTCGAGACAACTATGGTGTCTTCCCTTTGCGAGGAAAGCTACTCAACGTGCGT 560906
Query 217957 GATGCCTCGGTTTCAAGCATTGCT-GCAAATGCAGAGATTGCCGCCATCAAGCAAATCCT 218015
|| || ||| |||| | || | ||||| |||||| || |||||||| ||| |
Sbjct 560907 GAAGCGGCGG-GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATCAAGCAGATCTT 560965
Query 218016 GGGTCTTCAGGTTGGAAAGACTTACAAGGATG-CGTCATCTCTGCGTTATGGCTCTGTCA 218074
||||| ||| || || ||||| || | || | || || ||||| ||| |||
Sbjct 560966 AGGTCTGCAGCAGGGCAAAGTTTACACCGACGTCGAC-TCGCTCCGTTACGGCAAGCTCA 561024
Query 218075 TGCTTATGACTGATGCTGATGTTGACGGGTCCCACAT 218111
|| | ||| | ||| ||| || || || |||||
Sbjct 561025 TGATCATGGCCGATCAAGATCACGATGGATCGCACAT 561061
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||| || |||| ||||||||||
Sbjct 693186 GCCCGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 693245
Query 142564 CCCACATCGGGC 142575
||| ||| ||||
Sbjct 693246 CCCGCATTGGGC 693257
>seq37
Length=1030275
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 775527 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 775586
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 775587 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 775646
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | |||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 775647 CTCGAGAACTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 775706
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 775707 GGCTTCCT 775714
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 782051 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 781992
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 781991 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 781932
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | |||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 781931 CTCGAGAACTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 781872
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 781871 GGCTTCCT 781864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836246895322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |