Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq25 376 5e-99
seq39 129 1e-24
seq24 87.8 3e-12
>seq25
Length=1823320
Score = 376 bits (416), Expect = 5e-99
Identities = 869/1295 (67%), Gaps = 32/1295 (2%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 22066 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 22007
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 22006 GAATCGAACGGCATCGCCAAGGCCATGAATGCGTCGGCGAGACCTTGCACTCCGATGCCG 21947
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| || ||| |||||||| |||| ||||
Sbjct 21946 ATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCA 21887
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| |||| || ||||||
Sbjct 21886 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCTTGAAGTCG 21827
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 21826 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 21785
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| |||| || ||||| || || |||||||| |||||
Sbjct 21784 AAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTTC 21725
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 21724 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 21665
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
|||||||| || ||||| |||| |||||| |||| | ||| || ||| || |
Sbjct 21664 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGC-GTACCAAAGCTTTTG 21606
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| ||||| | ||||||| |||
Sbjct 21605 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAA 21546
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| | || |||| ||||||||| || ||||| | || ||| ||
Sbjct 21545 CTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGGGGCCAGTC 21486
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|||| || ||| ||| | || ||||||||| |||||||||||||| || |||||| ||
Sbjct 21485 GCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATC 21426
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | || ||| ||| |||||| | || |||| || |||||||||||
Sbjct 21425 ACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTC 21366
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
| ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 21365 GGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 21306
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | || |||| ||| || || | || || |||||||| |||| |||
Sbjct 21305 GACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 21246
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| ||||| |||||| | ||| | | | || |||| |||| || || | ||
Sbjct 21245 GTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACC 21186
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 21185 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGA 21126
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
|| |||||| ||| ||| ||||| || || ||||| || | || | | | |||
Sbjct 21125 ATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 21066
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAG 245469
||| || || || |||||||||||||||||| ||| | || ||||| ||| |
Sbjct 21065 GAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGACTGCA- 21007
Query 245470 CAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG- 245526
||| ||| ||||||| || |||||||| | |||| | |||||| |||| ||
Sbjct 21006 -AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGC 20948
Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584
|| ||| ||| | | || | ||| | |||| || ||||||||||||||||||
Sbjct 20947 GGTCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTTG 20891
Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCG 245644
|| |||||||| |||||| || ||| | || | ||||| || ||| | |||
Sbjct 20890 AAGCCAAAGTAGTTGTAGCCGAAATCGCGATCGTAGATAACGGCGCTGTTGAGGCGGTCG 20831
Query 245645 GCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678
||| || ||| |||||||||| || |||||
Sbjct 20830 GCGTTGGCCATGA-TGACCTCGTATGTCTCTTGCG 20797
Score = 84.2 bits (92), Expect = 4e-11
Identities = 170/252 (67%), Gaps = 13/252 (5%)
Strand=Plus/Minus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||||| || | ||||||||||| || | || |||||||||||| || ||
Sbjct 22918 ACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACATGCCCGTTTTC 22859
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
||||| | |||| ||| || |||||| | ||| || | | |||| |
Sbjct 22858 AGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATC-----------G 22810
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
||| |||| ||| || |||||| || || |||||||| ||||| | || ||
Sbjct 22809 TCGGGCTCG-ACAAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGGTCG 22751
Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976
|||| || | |||| | ||| || || | ||| | | ||||||||||||| ||||
Sbjct 22750 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTGTAGATGGCCTTG 22691
Query 243977 AGGT-GCTCGGG 243987
|| | |||||||
Sbjct 22690 AGATCGCTCGGG 22679
>seq39
Length=984724
Score = 129 bits (142), Expect = 1e-24
Identities = 189/263 (72%), Gaps = 11/263 (4%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | ||||| |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 93917 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 93976
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 93977 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 94036
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG-GGC---CATCATCACGGA 42919
|| ||||||| || ||| |||| || ||| ||| |||||||| |||
Sbjct 94037 TC---CCACCTCGAGC-GAAGACCTC---ACCCCGACACCGTGGCGCTCATCATCAAGGA 94089
Query 42920 GGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCAT 42979
||||||||| ||||| ||||| ||| | || || | || ||| || |||||||
Sbjct 94090 GGCCGTGGAAATCGAAAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCAT 94149
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | ||||||||| |||
Sbjct 94150 GAATGCGAAGCTCATGTGCCAGT 94172
>seq24
Length=1584903
Score = 87.8 bits (96), Expect = 3e-12
Identities = 172/247 (70%), Gaps = 13/247 (5%)
Strand=Plus/Minus
Query 42741 TCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCAC 42799
|| ||| |||||||||||||||| ||||||||| | ||| || ||||| || ||| |
Sbjct 311978 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAGAAACGAGGCCTC-ATGCCTGGCCTCTC 311920
Query 42800 CTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCT 42859
||||| ||||| ||||| | ||||| || || |||| || || || ||| |
Sbjct 311919 TTTCTCCAACGAGCTCATTTCGCGCGACGAAGGTCTTCATACCGAATTCGCGGTGCTCTT 311860
Query 42860 GTTCTCGAGCCACCTCAGGCACAAGCCCTCG--AAGGAGCGGGTC--CGGGCCATCATCA 42915
|||| ||||| || | || || || | ||||| || | ||| ||| | |
Sbjct 311859 GTTC---AGCCATCTGAA-CAAGAGACCAGGTCAAGGATTGGTGCATCGG---ATCGTGA 311807
Query 42916 CGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCG 42975
|||||| || || ||||||||||| ||| | || || | ||||||||| | ||| | |
Sbjct 311806 AGGAGGCGGTTGATATCGAGAAGGAATTCTTGACCGAGGCTCTGCCCGTGGCGCTGATTG 311747
Query 42976 GCATGAA 42982
| |||||
Sbjct 311746 GTATGAA 311740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338704221920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |