Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq17 113 1e-19 seq26 86.0 1e-11 >seq17 Length=1685150 Score = 113 bits (124), Expect = 1e-19 Identities = 251/369 (68%), Gaps = 12/369 (3%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 |||||| || | || ||||||||||| || || || | ||||| | || | || Sbjct 61176 CCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATCCGAGACGAC 61235 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || || ||||| |||||||| || || ||||||||||| | |||||| || Sbjct 61236 GCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTCAA 61295 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||| |||||||| ||||||| | |||||| || | ||||| ||| ||| Sbjct 61296 GAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCAC--GAG 61353 Query 68585 TCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAA--TCACGAAGGTGGTCGCGAATA 68640 |||| | | || | | || ||||| | || | || ||| | ||||| | | Sbjct 61354 TCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGA--GCTGTCGCCGAGA 61411 Query 68641 TTTTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTG 68698 | || | | ||| | | | ||| | || ||||| || | || ||||| | ||||| Sbjct 61412 -TCTCGCTCG-GTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGATTG 61469 Query 68699 GGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGA 68758 |||| | ||| |||||||| || | |||||| |||||||||| ||||| || || || Sbjct 61470 GGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 61529 Query 68759 TGACTATGT 68767 |||| ||| Sbjct 61530 CGACTTTGT 61538 >seq26 Length=2192579 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395 |||||||||||||| ||||| | | ||| | || || || ||||||||||||||||| Sbjct 1907147 TAACGCCATTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 1907088 Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 333437 || || || |||||||| || | ||||| || || |||||| Sbjct 1907087 GCGTGTTGGGCCACGTACGCTACACGCAAGTTGGGGTGCTTC 1907046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879406512700