Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq17 113 1e-19
seq26 86.0 1e-11
>seq17
Length=1685150
Score = 113 bits (124), Expect = 1e-19
Identities = 251/369 (68%), Gaps = 12/369 (3%)
Strand=Plus/Plus
Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464
|||||| || | || ||||||||||| || || || | ||||| | || | ||
Sbjct 61176 CCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATCCGAGACGAC 61235
Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524
|| || || ||||| |||||||| || || ||||||||||| | |||||| ||
Sbjct 61236 GCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTCAA 61295
Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584
|| ||||| |||||||| ||||||| | |||||| || | ||||| ||| |||
Sbjct 61296 GAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCAC--GAG 61353
Query 68585 TCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAA--TCACGAAGGTGGTCGCGAATA 68640
|||| | | || | | || ||||| | || | || ||| | ||||| | |
Sbjct 61354 TCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGA--GCTGTCGCCGAGA 61411
Query 68641 TTTTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTG 68698
| || | | ||| | | | ||| | || ||||| || | || ||||| | |||||
Sbjct 61412 -TCTCGCTCG-GTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGATTG 61469
Query 68699 GGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGA 68758
|||| | ||| |||||||| || | |||||| |||||||||| ||||| || || ||
Sbjct 61470 GGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 61529
Query 68759 TGACTATGT 68767
|||| |||
Sbjct 61530 CGACTTTGT 61538
>seq26
Length=2192579
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395
|||||||||||||| ||||| | | ||| | || || || |||||||||||||||||
Sbjct 1907147 TAACGCCATTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 1907088
Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 333437
|| || || |||||||| || | ||||| || || ||||||
Sbjct 1907087 GCGTGTTGGGCCACGTACGCTACACGCAAGTTGGGGTGCTTC 1907046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879406512700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |