Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq25 280 1e-70 >seq25 Length=1823320 Score = 280 bits (310), Expect = 1e-70 Identities = 740/1123 (66%), Gaps = 25/1123 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| ||||| | || || || |||| | Sbjct 20874 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCGTATTTGCTTCGCATCGACGGCAAG 20933 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| |||||||| || |||| |||||||||||| |||| || ||||| |||||| Sbjct 20934 GTCGCCGAACGACCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 20993 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| ||| | | || |||| ||| Sbjct 20994 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCGGA---GCGCTACTTTACCCACGCC 21050 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || ||||| |||||| | Sbjct 21051 TCGCCGACACTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTC 21110 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || ||| || || | ||||| |||||| || ||| |||| Sbjct 21111 ACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 21170 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || || ||| Sbjct 21171 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTAC 21230 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| |||||| Sbjct 21231 ATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAT 21290 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 21291 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 21350 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 21351 GAGCCTTGGCACGCCGACGTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 21410 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || || ||| | || Sbjct 21411 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGA 21470 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || |||| || || || ||| ||| ||||| || ||| Sbjct 21471 GTCGAGGCCGCCGGCGACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAA 21530 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 |||| ||| | ||| | | | ||| | |||||| | ||||| |||| Sbjct 21531 GTTTATGGCGAAGAGTTCCG-CGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAA 21589 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| | ||| | || | ||||| || || || Sbjct 21590 GAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGG 21649 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | ||||||| | | ||| || || ||||| || |||| || Sbjct 21650 CAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGG 21709 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| ||||||||||| || ||||||| | | ||||||||| Sbjct 21710 CACGATCAAGTCGTCGAACCTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAGTG 21769 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || ||| Sbjct 21770 CGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 21823 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732 ||| |||| | ||| | ||| | || || ||| | | || ||| Sbjct 21824 GTACGACTTC-AAGAAGCTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAACT 21873 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 ||||| | | || ||| |||| |||||||||| |||||| | ||||| ||| | Sbjct 21874 TGAACCGCATCATTGACGTTAACTACTACCCCGTCATCGAGGCGCAAAACTCCAACTTCC 21933 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGC 94835 || || |||||||||||||| || || ||| |||| ||||| Sbjct 21934 GCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGC 21976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722940270320