Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq38 96.9 3e-15 seq25 95.1 1e-14 seq24 93.3 4e-14 >seq38 Length=1003587 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || |||||| || || ||| || | || Sbjct 149148 TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGC 149089 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||||||||| || || |||||||| || ||||| || || Sbjct 149088 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTG 149029 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||||| |||||||| ||||| || | ||| ||||| || Sbjct 149028 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCTGT 148970 Query 45317 TAGAGTTTTTACAAAAATTTGC 45338 ||||| || || || |||||| Sbjct 148969 AAGAGTCTTGACGAAGATTTGC 148948 >seq25 Length=1823320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 45109 TTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATA 45166 ||||| || || ||||| | | ||| | || || || || || || ||||| || || Sbjct 1053398 TTATTGACCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTA 1053457 Query 45167 ATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTC 45226 ||| || || ||| || | || || || ||| | |||||||| |||||||| Sbjct 1053458 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTC 1053517 Query 45227 CGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAG 45285 || ||||| || || || ||||| || || |||| || | || | ||||| |||| Sbjct 1053518 TGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAG 1053576 Query 45286 ACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| ||||| || | || ||||| || || || || ||||| |||||||| Sbjct 1053577 ACTCGACCTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1053631 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | || || || || ||||| ||||| || ||||| Sbjct 1053630 ATACCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCT 1053689 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | ||| || || || | || | ||||| ||||| || Sbjct 1053690 GCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGG 1053749 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || |||||||| || |||| || | || | ||||| |||||||| Sbjct 1053750 GGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCTGAAGACTC 1053808 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || |||||||| | || || ||||| |||||||| Sbjct 1053809 GACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1053859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | || || || || ||||| ||||| || || ||| Sbjct 1054542 ATACCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 1054601 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || || || || | |||||||| |||||||| || Sbjct 1054602 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGG 1054661 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || ||||| || || |||| || | || | ||||| |||||||| Sbjct 1054662 GGAATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTC 1054720 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || ||||| || || || || ||||| |||||||| Sbjct 1054721 GACCTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1054771 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | || || || || ||||| ||||| || ||||| Sbjct 1054770 ATACCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCT 1054829 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | ||| || || || | || | ||||| ||||| || Sbjct 1054830 GCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGG 1054889 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || |||||||| || |||| || | || | ||||| |||||||| Sbjct 1054890 GGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGAAGACTC 1054948 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| ||||| || | || ||||| || || || || ||||| || |||||| Sbjct 1054949 GACCTCGAGTGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCATC 1055000 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 ||| |||| | || ||||||||||| | |||| |||||||||||| |||||| ||| Sbjct 21624 ATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAAC 21683 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAAT-GTAGTAATCTTTGCTCCGAAAT 123706 | |||| | || || | ||| | || || || || | || | || || ||| ||||||| Sbjct 21684 AAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG-AACCTGTGCACCGAAAT 21742 Query 123707 TATCGAATACAGCGATGCCGATCAAGTG-GCCGTGTGTAATTTGGCTTCGAT 123757 ||||| ||| || |||| | |||| ||||| || || ||||| ||||| Sbjct 21743 CATCGAGTACTCCG-CGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGAT 21793 >seq24 Length=1584903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||||||||| || |||||| || || ||| || | || Sbjct 1347377 TGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGC 1347436 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | ||||||||||| || || |||||||| || ||||| || || Sbjct 1347437 TTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTG 1347496 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | |||||||| |||||||| ||||| || | || ||||| || Sbjct 1347497 GTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1347555 Query 45317 TAGAGTTTTTACAAAAATTTGCA 45339 || || || || || ||||||| Sbjct 1347556 GAGGGTCTTGACGAAGATTTGCA 1347578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002962698320