Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq25 102 1e-16 >seq25 Length=1823320 Score = 102 bits (112), Expect = 1e-16 Identities = 344/530 (65%), Gaps = 12/530 (2%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| |||||| || | | || |||||||| || | | | | || Sbjct 21467 CTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 21408 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284 | || ||||||| | |||||| | | | |||||||||||| ||||| | Sbjct 21407 CTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAG 21348 Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 21347 GTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATT 21288 Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404 |||| | || || ||||| || || | ||||| | | |||||||||| | |||| Sbjct 21287 GTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTA 21228 Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGAT 205464 ||||| || | | |||| |||| | || || || || | ||||| ||| Sbjct 21227 AGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGAT 21168 Query 205465 CTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523 | |||||| ||||| || ||| |||||||||| |||| ||||| ||| || || | Sbjct 21167 GAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGA 21109 Query 205524 CCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582 |||| ||||||| | |||| || || || || |||| |||||| || || | Sbjct 21108 CCAGGAAGCACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGTGTCGGCGAG 21050 Query 205583 GCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCAG 205638 |||||| | ||| | ||||| ||| |||| | || || |||| ||| | Sbjct 21049 GCGTGGGTAAAG----TAGCGCTCCGACATGAGGTTGTACGACTGCAAGACGCGCTCGAT 20994 Query 205639 ATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTC 205688 ||| ||||| || || | ||||| | ||||| | |||||| |||| Sbjct 20993 GTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTC 20944 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/228 (70%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 |||||| || || ||||||| || || ||||| | || | | || |||||||| Sbjct 22928 GTCTTGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACAT 22869 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954 ||| || || || || || ||| ||||| | |||||| || | |||| || ||| Sbjct 22868 GCCCGTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGT 22809 Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013 ||| ||| | | ||| ||||| || || || ||||||||| ||||| || || || Sbjct 22808 CGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGGTCG 22751 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | || |||||||| ||||| | |||||| || |||||| Sbjct 22750 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTG 22703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154782543520