Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq25 102 1e-16
>seq25
Length=1823320
Score = 102 bits (112), Expect = 1e-16
Identities = 344/530 (65%), Gaps = 12/530 (2%)
Strand=Plus/Minus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||| || || ||| |||||| || | | || |||||||| || | | | | ||
Sbjct 21467 CTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 21408
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284
| || ||||||| | |||||| | | | |||||||||||| ||||| |
Sbjct 21407 CTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAG 21348
Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 21347 GTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTATT 21288
Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404
|||| | || || ||||| || || | ||||| | | |||||||||| | ||||
Sbjct 21287 GTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTA 21228
Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGAT 205464
||||| || | | |||| |||| | || || || || | ||||| |||
Sbjct 21227 AGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGAT 21168
Query 205465 CTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523
| |||||| ||||| || ||| |||||||||| |||| ||||| ||| || || |
Sbjct 21167 GAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCATCGTGA 21109
Query 205524 CCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582
|||| ||||||| | |||| || || || || |||| |||||| || || |
Sbjct 21108 CCAGGAAGCACGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGTGTCGGCGAG 21050
Query 205583 GCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCAG 205638
|||||| | ||| | ||||| ||| |||| | || || |||| ||| |
Sbjct 21049 GCGTGGGTAAAG----TAGCGCTCCGACATGAGGTTGTACGACTGCAAGACGCGCTCGAT 20994
Query 205639 ATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTC 205688
||| ||||| || || | ||||| | ||||| | |||||| ||||
Sbjct 20993 GTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTC 20944
Score = 87.8 bits (96), Expect = 3e-12
Identities = 160/228 (70%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895
|||||| || || ||||||| || || ||||| | || | | || ||||||||
Sbjct 22928 GTCTTGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACAT 22869
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954
||| || || || || || ||| ||||| | |||||| || | |||| || |||
Sbjct 22868 GCCCGTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGT 22809
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
||| ||| | | ||| ||||| || || || ||||||||| ||||| || || ||
Sbjct 22808 CGGGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCGATG-AAGGCACCTCGGTCG 22751
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|||| || | || |||||||| ||||| | |||||| || ||||||
Sbjct 22750 GCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTG 22703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154782543520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |