Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq26 361 7e-95 seq28 167 3e-36 seq20 132 6e-26 seq17 95.1 2e-14 >seq26 Length=2192579 Score = 361 bits (400), Expect = 7e-95 Identities = 656/959 (68%), Gaps = 3/959 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 398611 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 398670 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 398671 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 398730 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | |||||| || | || | || |||||||| ||| Sbjct 398731 ATACGAGTGGAACCACCAACGAGAACGATCTCGTGGACGGAGGCCTTGTCGATCTTGGAG 398790 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||||||||| |||| ||| Sbjct 398791 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGCCTCGGAACAAGTCTTGGCACAACTCC 398850 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| || || || ||||| || | || ||| | | ||| || || Sbjct 398851 TCGAAGCGGGCACGGGTGATAGAGGTGTAGAAGTCGATACCCTCGAAAAGCGAGTCGATC 398910 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 398911 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCGGTGCGG 398970 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 398971 AGACGACGGAGAGCACGGGCGTTCGATGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 399030 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 399031 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 399090 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 399091 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGAGACATCGAACGTT 399150 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 399151 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTCTTGTCGAGGCCG 399210 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || || || ||||| || ||| ||||| | || Sbjct 399211 TAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCCCGAGATG 399270 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 399271 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 399330 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | |||||||| ||| || Sbjct 399331 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCTTTCATCTTGAGCAGG 399390 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | || || || || || || | || || || Sbjct 399391 ATCATGGACGAGATTTCCTCGGGGGTGAATTGCTTGGTCTCGCCTCGGTACTCGACCTCG 399450 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 || ||||| || | | | || |||||| | | ||| | ||||| ||| Sbjct 399451 ATGATGGGCTT---GGTTCCCTTGTCGACAACCTTGAAGGGCCAGTGCTTCATGTCGGAC 399507 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || || ||||| ||||| || || ||||| Sbjct 399508 TGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 399566 >seq28 Length=3235273 Score = 167 bits (184), Expect = 3e-36 Identities = 326/478 (68%), Gaps = 13/478 (3%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| ||||| | ||| | |||||| ||||||||||||| |||| Sbjct 1557642 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGGGCACGCGGGTCCTCGGAG 1557583 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457 || || ||| | || | | |||||| | |||||| || ||| | | | | | Sbjct 1557582 ATGTCGAGCTTGTTCTTCCTCTCAAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1557525 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || |||||||||||||| || || || ||||| || ||||| | |||| ||| | Sbjct 1557524 CAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1557465 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||| | || | ||| ||||| || || || || || || || || ||||| ||| Sbjct 1557464 CCGAGATGGTCAAAAGCGAGACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGAACGA 1557405 Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 | | || | | ||| || || | |||||||||| ||||| || || || | Sbjct 1557404 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGACCGTAGGCGATGGCGGCAGCGG 1557345 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || ||||| || || || || || || ||| | || || || |||| Sbjct 1557344 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCGGCGATCGTTCCGGCGTCCTTGGTCG 1557285 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | || Sbjct 1557284 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTAACGACGGCCTTCTTGACCTCCT 1557225 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 | ||||| | | || ||| | || || | |||| || ||||| || || ||||| Sbjct 1557224 TGCCGAGCTTGGTCTCGGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1557167 Score = 102 bits (112), Expect = 1e-16 Identities = 113/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 1556911 CTTGGCCGAGTCACCAATGAGACGCTCTGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1556855 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1556854 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1556795 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACC 8142 ||| || || || ||||| | ||| ||||| Sbjct 1556794 GCAGGAGTAGGTGGTTCCGAGATCGATACC 1556765 >seq20 Length=1821730 Score = 132 bits (146), Expect = 6e-26 Identities = 226/327 (69%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||||||| || || || ||||| || || || |||| ||| Sbjct 82610 TCGAAGTCCTCACCGCCCAAGTGGGTGTCACCGGCGGTGGCCAAAACCTCGAAGACACCG 82551 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 82550 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 82491 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 82490 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 82434 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| ||| || || || || || || | || || || |||||||||||| Sbjct 82433 TTAACGACACGGAGAACATTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 82374 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| || || ||||| || | Sbjct 82373 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTAACCTTCTTGCCCAAG 82314 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 82313 TAGGCCTCGGCGGTCTCCTTCATCTTG 82287 >seq17 Length=1685150 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | || || || || || || || ||| || Sbjct 61171 TTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATCCGAG 61230 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| |||||||| || || || || || ||| | | ||| | Sbjct 61231 ACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATC 61290 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| ||||| |||||||||| Sbjct 61291 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 61349 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | ||| ||||| | || || | | | |||||| | Sbjct 61350 CGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGCCGA 61409 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || ||||| Sbjct 61410 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGATTG 61469 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||||||||| | ||||||||| || | || ||||| | || || Sbjct 61470 GGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 61529 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 61530 CGACTTTGT 61538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132466555280