Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq25 152 6e-32
seq17 145 9e-30
seq24 131 2e-25
seq39 104 3e-17
>seq25
Length=1823320
Score = 152 bits (168), Expect = 6e-32
Identities = 517/798 (65%), Gaps = 17/798 (2%)
Strand=Plus/Plus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
||||| ||||||| ||||| |||| ||||| || | || || || || ||| ||
Sbjct 20953 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21012
Query 111679 CATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCT 111737
| ||| || ||||| | | || || | |||||| | || || |||||||||||
Sbjct 21013 CGTACAACCTCATGTCGGAGCGCTACTTT-ACCCACGCCTCGCCGACACTCTTCAACGCC 21071
Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797
|| || || || || | || || ||||| | | | ||||| ||||| |||
Sbjct 21072 GGAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATC 21131
Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857
| ||||| |||| ||| |||| || || | ||||| ||| || |||||||||
Sbjct 21132 GAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATC 21191
Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917
|| || |||||| | || | || | | ||| || || || || || |
Sbjct 21192 GGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTAC 21251
Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977
|| | || || | || ||||| || || | ||| || |||||||| || |||||
Sbjct 21252 TCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAA 21311
Query 111978 GCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031
| ||| ||||| | ||| | |||| |||| || ||||| |||||||| ||
Sbjct 21312 GGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGAC 21368
Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCG 112089
|| | |||||||| || | || ||||| || | ||||| | |||| | || |
Sbjct 21369 GTCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCT--CGTG 21426
Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149
||||||||| || |||||||| || |||||||||||| || |||| |||| |||
Sbjct 21427 ATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCG 21486
Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209
| ||| | || || || || | | | || ||||| ||| ||| | || || ||||
Sbjct 21487 ACTGGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGT 21546
Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTG 112269
| ||||| | | || ||||| | || | || || | |||| | || || |
Sbjct 21547 TCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-G 21605
Query 112270 CCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328
| | | | ||| | || |||||| || | || ||| || || | || | |||||
Sbjct 21606 CAAAAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTC 21665
Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388
||||| |||||| ||| | || || |||||||| | || ||||||| ||
Sbjct 21666 TACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG 21725
Query 112389 AACCTCTGTACAGAAATC 112406
||||| || || ||||||
Sbjct 21726 AACCTGTGCACCGAAATC 21743
>seq17
Length=1685150
Score = 145 bits (160), Expect = 9e-30
Identities = 268/393 (68%), Gaps = 0/393 (0%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| ||| ||||| ||| | || |||
Sbjct 61167 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTCGAGACCCCTCAATC 61226
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || || ||||||||| | ||| | || ||
Sbjct 61227 CGAGACGACGCCCTTCTACCCTCGTTCACCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 61286
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 61287 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 61346
Query 13772 CCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAA 13831
||| || || ||| | || ||| ||||||||| | ||||||| || | | ||
Sbjct 61347 CCACGAGTCCCCGCGTCGTGGTCGTACCTTTGTGACGAGGAAGATTTCCCGAGCTGTCGC 61406
Query 13832 ACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGA 13891
| ||| | ||| || |||| | | | | | || ||| | | || || | ||
Sbjct 61407 CGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGA 61466
Query 13892 TTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGC 13951
|||||| |||||| || || || || | ||||||| | ||||| || ||||| |
Sbjct 61467 TTGGGGACACGCGCGCGATTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCC 61526
Query 13952 CGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
|||||| | ||| | || ||||||||||||||
Sbjct 61527 CGACGACTTTGTCCTCGCGACGGGTGAGACCCA 61559
>seq24
Length=1584903
Score = 131 bits (144), Expect = 2e-25
Identities = 236/337 (70%), Gaps = 10/337 (3%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 561079 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 561020
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || || | || ||||| || ||||| ||||||
Sbjct 561019 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCTAAGATC 560960
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| || ||| | | || | || | | || |||||
Sbjct 560959 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 560903
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || ||| || || | |||||||||||| |||| || ||||| || ||||
Sbjct 560902 ACGTTGAGTAGCTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 560843
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || ||||||| || || ||||| || || |||| ||||||||| ||||||
Sbjct 560842 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGTGTGCACTTG 560783
Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|| | | | |||||| || || |||||||| ||
Sbjct 560782 GACCCGTTCCT--CGTACCAGCGTTATTCGCATCTTC 560748
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 102222 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 102281
|| || |||||| | | || | |||||||||||| ||||| |||||||| || ||||
Sbjct 311978 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAGAAACGAGGCCTCATGCCTGGCCTCTCT 311919
Query 102282 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335
|||||||||||||| || || || ||||| || || || || || ||||||
Sbjct 311918 TTCTCCAACGAGCTCATTTCGCGCGACGAAGGTCTTCATACCGAATTCGCGGTG 311865
>seq39
Length=984724
Score = 104 bits (114), Expect = 3e-17
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 270946 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 270887
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || ||| |||||||||| | ||| | || ||
Sbjct 270886 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 270827
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| |||||||||||
Sbjct 270826 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 270767
Query 13772 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 13816
||| || || || | || || ||| |||||| |||| |||||
Sbjct 270766 CCACGAGTCCCCCCGTCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 270722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742074110240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |