Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq25 100 2e-16 seq24 91.5 1e-13 seq38 82.4 5e-11 >seq25 Length=1823320 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| ||||| ||||| | || | || |||| || Sbjct 1053423 ACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1053482 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| Sbjct 1053483 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 1053542 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 1053543 ATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTG 1053602 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| |||||||| |||||| Sbjct 1053603 CCCGTCAGCGTCTTGACAAAGATTTGCATA 1053632 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 1054563 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1054622 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || | ||| ||||||||| | || | ||||||||||| Sbjct 1054623 AGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 1054682 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 1054683 ATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTG 1054742 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || ||||| |||||||| |||||| Sbjct 1054743 CCCGTCAGCGTCTTGACAAAGATTTGCATA 1054772 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| || || | || | || |||| || Sbjct 1054791 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCCTCG 1054850 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || ||||| || || ||||| |||||| | || | ||||||||||| | Sbjct 1054851 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGA 1054910 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || ||||| || Sbjct 1054911 ATCTTGGTCTTGACGTTGTCAATCGTGTCCGAAGACTCGACCTCGAGTGTGATGGTCTTG 1054970 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| |||||||||||||| Sbjct 1054971 CCAGTCAGGGTCTTAACAAAGATCTGCAT 1054999 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1293642 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1293701 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1293702 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1293761 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1293762 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1293821 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1293822 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1293855 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1294326 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1294385 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1294386 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1294445 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1294446 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1294505 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1294506 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294539 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1294782 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1294841 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1294842 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1294901 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1294902 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1294961 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1294962 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294995 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1295010 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295069 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1295070 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1295129 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1295130 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1295189 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1295190 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295223 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1295238 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295297 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1295298 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1295357 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1295358 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1295417 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1295418 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295451 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1295466 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295525 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1295526 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1295585 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1295586 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1295645 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1295646 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295679 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || ||||| ||||| ||||| | || | || |||| Sbjct 1295694 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295753 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1295754 CTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1295813 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | |||| || || ||| || |||| || || || Sbjct 1295814 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1295873 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || ||||| |||||| Sbjct 1295874 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295907 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 1293418 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1293477 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || ||||| |||||| | || | ||||||||||| | Sbjct 1293478 AGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 1293537 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | |||| || || ||| || |||| || || || || Sbjct 1293538 ATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 1293597 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| || ||||| |||||| Sbjct 1293598 CCGGTCAAGGTCTTGACGAAGATTTGCATA 1293627 Score = 84.2 bits (92), Expect = 1e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | || || || |||||||| ||||| | || | || |||| Sbjct 1295922 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295981 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || || || || ||||| || || ||||| |||||| | || | ||||||||||| Sbjct 1295982 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1296041 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | |||| || || ||| || |||| || || || Sbjct 1296042 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1296101 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| |||||||| |||||| Sbjct 1296102 CTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 1296135 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| || || | || | || |||| || Sbjct 1053651 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCCTCG 1053710 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || || || ||||| || || ||||| |||||| | || | ||||||||||| | Sbjct 1053711 AGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGA 1053770 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || ||||| || Sbjct 1053771 ATCTTGGTCTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTG 1053830 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| |||||||| |||||| Sbjct 1053831 CCGGTCAAGGTCTTGACAAAGATTTGCATA 1053860 >seq24 Length=1584903 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| || || | || | || |||| || Sbjct 1347371 ACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 1347430 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| | || | || |||||||| Sbjct 1347431 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 1347490 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| ||||| || Sbjct 1347491 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 1347550 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980 |||||||| ||||| || ||||| |||| Sbjct 1347551 CCCGTGAGGGTCTTGACGAAGATTTGCA 1347578 >seq38 Length=1003587 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| || || | || | || |||| || Sbjct 149154 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 149095 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| | || | || |||||||| Sbjct 149094 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 149035 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 149034 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 148975 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT-ATTCG 34986 || || |||||||| || ||||| ||| | ||||| Sbjct 148974 CCTGTAAGAGTCTTGACGAAGATTTGCCTGATTCG 148940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633433828176