Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq39 138 9e-28 >seq39 Length=984724 Score = 138 bits (152), Expect = 9e-28 Identities = 195/273 (71%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TACTCTGCTCC 30170 || |||||| |||||| |||| ||| || || | | |||| |||||||| || Sbjct 222285 CAACTGATCGACCCCCTCCCCCTGGTAATCATCCTT---GGCCGTTCTATACTCTGCGCC 222341 Query 30171 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30230 || ||||||||||||||||| || ||||| |||| || ||||||| ||| ||| | || Sbjct 222342 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 222401 Query 30231 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30290 || |||||||| || | ||| || || || | ||||| ||||| ||||||||||| Sbjct 222402 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 222461 Query 30291 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30350 ||| | ||| || | || || |||| |||||||| || || ||||| | || | Sbjct 222462 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 222521 Query 30351 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||||| |||| || || | |||||| Sbjct 222522 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 222554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617390838866