Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq39 138 9e-28
>seq39
Length=984724
Score = 138 bits (152), Expect = 9e-28
Identities = 195/273 (71%), Gaps = 6/273 (2%)
Strand=Plus/Plus
Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TACTCTGCTCC 30170
|| |||||| |||||| |||| ||| || || | | |||| |||||||| ||
Sbjct 222285 CAACTGATCGACCCCCTCCCCCTGGTAATCATCCTT---GGCCGTTCTATACTCTGCGCC 222341
Query 30171 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30230
|| ||||||||||||||||| || ||||| |||| || ||||||| ||| ||| | ||
Sbjct 222342 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 222401
Query 30231 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30290
|| |||||||| || | ||| || || || | ||||| ||||| |||||||||||
Sbjct 222402 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 222461
Query 30291 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30350
||| | ||| || | || || |||| |||||||| || || ||||| | || |
Sbjct 222462 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 222521
Query 30351 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| ||||||| |||| || || | ||||||
Sbjct 222522 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 222554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617390838866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |