Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq38 105 5e-18
seq24 93.3 3e-14
>seq38
Length=1003587
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| |||| | ||| | || || || ||||| || || ||||| || ||||||||||||
Sbjct 149172 CCACCTCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCG 149113
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||| || ||||| || | ||| || || || || ||
Sbjct 149112 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 149053
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || ||||| || || || || | || | ||||| |||| || ||
Sbjct 149052 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 148993
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473
|| || |||| ||| ||||| || | ||| || || || || ||| || ||
Sbjct 148992 TCGAGGGTGATCGTCTTGCCTGTAAGAGTCTTGACGAAGATTTGCCTGATT 148942
>seq24
Length=1584903
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/213 (70%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || || || || ||||| || ||||||||||||| || | | |||| ||
Sbjct 1347371 ACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCG 1347430
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || ||||| || | ||| || || || || || |||||||| || |||||
Sbjct 1347431 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 1347490
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||||| |||| || || || || |||| || |||
Sbjct 1347491 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 1347550
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCA-TGGT 101472
|| || | || || || || || |||| ||||
Sbjct 1347551 CCCGTGAGGGTCTTGACGAAGATTTGCACTGGT 1347583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278197154994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |