Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq25 167 4e-36
seq24 107 4e-18
>seq25
Length=1823320
Score = 167 bits (184), Expect = 4e-36
Identities = 785/1235 (64%), Gaps = 40/1235 (3%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || |||| | |||||
Sbjct 22084 GCCATATCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 22025
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | ||| | || || ||
Sbjct 22024 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAAGGCCATGAATGCGTCGGCGAGA 21965
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | ||| || || | || ||| |
Sbjct 21964 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTCGATGAC 21906
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| |||| ||| ||||| ||| | |||| | | | || ||| ||| |
Sbjct 21905 GGGGTAGTAGTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 21846
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| ||| | || |||| |||| | |||| || | || ||| |||| ||||
Sbjct 21845 GTGCAGCTTCT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 21793
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||| ||||| ||| | | | | |||||| ||||| |||||||
Sbjct 21792 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGC 21733
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
||||||| | ||| ||||| ||||||| ||||| || || ||| || | |
Sbjct 21732 ACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGT 21673
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| | ||| ||||| || | ||||| | | || ||| | ||| |
Sbjct 21672 CCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAA 21613
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726
| | || || | | | || | ||| | | || ||||| | |||
Sbjct 21612 GCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 21559
Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783
| || || ||| || | ||| | || || || || || || | ||||| |
Sbjct 21558 ACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 21502
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
| | ||| |||||| ||| | | ||||| || |||||| || || |||| ||| |
Sbjct 21501 AGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGA 21442
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
|||| ||| || || | | | || ||| || ||| ||||| || || |
Sbjct 21441 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 21382
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || ||||||| ||| |||||||| ||||| | |||||| || ||||| || | ||
Sbjct 21381 GGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 21322
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| || ||||| || | || ||||| ||| || || | ||| || |
Sbjct 21321 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGA 21262
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
||||| || | ||||| || || || || || ||||||| || | | |||| |
Sbjct 21261 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGA 21202
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
|| | || || ||||||||| ||||||||| | ||||| | | | || ||
Sbjct 21201 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 21142
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
|||||| | || ||||| | | | | || |||||| ||| ||||| ||
Sbjct 21141 AGATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGT 21082
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257
| || || | |||||| || || || ||| ||| |||| | | | || |
Sbjct 21081 GAGGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCCGACA 21025
Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317
||| |||| | || || ||| ||||||||| |||||| | ||| |
Sbjct 21024 TGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGC 20965
Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374
||| |||||||| || || | || || | ||| | | || |||| || |
Sbjct 20964 GCATGAGCATGTGTTGCGGTCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAATACG 20908
Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409
||||||| || |||||||| ||||||||| ||||
Sbjct 20907 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 20873
>seq24
Length=1584903
Score = 107 bits (118), Expect = 4e-18
Identities = 164/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514
||||| || || |||||| ||| ||||| | |||||| || | ||||| |||||
Sbjct 312431 ATCTGAAAGCCATAGAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTCG 312490
Query 48515 AGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
| |||||||||||| || | ||||| ||||| || |||||||| || || || ||
Sbjct 312491 ACCAGATTCTCATTCACGACGCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGCGCAATA 312550
Query 48575 AAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCC 48631
|| | ||| |||| || | |||| | |||| | | | ||| ||||| || ||
Sbjct 312551 AAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTAGAGGTCGTTGCCGAGATCG 312610
Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 312611 ATCTCTTCGGCGGACCAAAAGGACGCTTGAGCTTGTTTGTACATGGCCCAGAT 312663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532310945280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |