Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq25 167 4e-36 seq24 107 4e-18 >seq25 Length=1823320 Score = 167 bits (184), Expect = 4e-36 Identities = 785/1235 (64%), Gaps = 40/1235 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || |||| | ||||| Sbjct 22084 GCCATATCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 22025 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | ||| | || || || Sbjct 22024 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAAGGCCATGAATGCGTCGGCGAGA 21965 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 21964 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTCGATGAC 21906 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 |||||| |||| ||| ||||| ||| | |||| | | | || ||| ||| | Sbjct 21905 GGGGTAGTAGTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 21846 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | ||| | || |||| |||| | |||| || | || ||| |||| |||| Sbjct 21845 GTGCAGCTTCT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 21793 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||| ||||| ||| | | | | |||||| ||||| ||||||| Sbjct 21792 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGC 21733 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 ||||||| | ||| ||||| ||||||| ||||| || || ||| || | | Sbjct 21732 ACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGT 21673 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 |||||||||||||| | ||| ||||| || | ||||| | | || ||| | ||| | Sbjct 21672 CCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAA 21613 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726 | | || || | | | || | ||| | | || ||||| | ||| Sbjct 21612 GCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 21559 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | || || ||| || | ||| | || || || || || || | ||||| | Sbjct 21558 ACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 21502 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | ||| |||||| ||| | | ||||| || |||||| || || |||| ||| | Sbjct 21501 AGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGA 21442 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 |||| ||| || || | | | || ||| || ||| ||||| || || | Sbjct 21441 GCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 21382 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || ||||||| ||| |||||||| ||||| | |||||| || ||||| || | || Sbjct 21381 GGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 21322 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | || ||||| ||| || || | ||| || | Sbjct 21321 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGA 21262 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | ||||| || || || || || ||||||| || | | |||| | Sbjct 21261 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGA 21202 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140 || | || || ||||||||| ||||||||| | ||||| | | | || || Sbjct 21201 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGT 21142 Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200 |||||| | || ||||| | | | | || |||||| ||| ||||| || Sbjct 21141 AGATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGT 21082 Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAGA 214257 | || || | |||||| || || || ||| ||| |||| | | | || | Sbjct 21081 GAGGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCCGACA 21025 Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACC 214317 ||| |||| | || || ||| ||||||||| |||||| | ||| | Sbjct 21024 TGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGC 20965 Query 214318 TCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGG 214374 ||| |||||||| || || | || || | ||| | | || |||| || | Sbjct 20964 GCATGAGCATGTGTTGCGGTCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAATACG 20908 Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 ||||||| || |||||||| ||||||||| |||| Sbjct 20907 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 20873 >seq24 Length=1584903 Score = 107 bits (118), Expect = 4e-18 Identities = 164/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514 ||||| || || |||||| ||| ||||| | |||||| || | ||||| ||||| Sbjct 312431 ATCTGAAAGCCATAGAAGCACCTCGCCTCGGCGAACTGCACCTCACTTGAGAACCTCTCG 312490 Query 48515 AGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 | |||||||||||| || | ||||| ||||| || |||||||| || || || || Sbjct 312491 ACCAGATTCTCATTCACGACGCCATCCGAAGCGGCGAAGAAGGCGAGCACGTGCGCAATA 312550 Query 48575 AAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCC 48631 || | ||| |||| || | |||| | |||| | | | ||| ||||| || || Sbjct 312551 AAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTAGAGGTCGTTGCCGAGATCG 312610 Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | ||||| | | ||| |||||||| | |||| |||||||||| |||| || Sbjct 312611 ATCTCTTCGGCGGACCAAAAGGACGCTTGAGCTTGTTTGTACATGGCCCAGAT 312663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532310945280