Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25 260 3e-64 seq24 111 3e-19 seq39 86.0 1e-11 >seq25 Length=1823320 Score = 260 bits (288), Expect = 3e-64 Identities = 796/1216 (65%), Gaps = 41/1216 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| |||||| ||||||||| |||| |||||||| ||| Sbjct 22060 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCGGGTGAA 22004 Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 ||| ||||| ||| || |||| | ||||||| || || || |||||||| |||| Sbjct 22003 TCGAACGGCAT-CGCCAAGGCCATGAATG-CGTCGGCGAGACCTTGCACTCCGATGCCGA 21946 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | |||||| ||| || ||||| || |||| ||||| | Sbjct 21945 TGGGGCGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTAACGTCAA 21886 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||| | ||| | || || ||| || || |||||| |||||||| ||| Sbjct 21885 TGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCT------TGA 21832 Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717 | | || ||||| || || | | || ||| ||| | || ||||| Sbjct 21831 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGAT--------CGA-GGCCA 21784 Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777 ||| || ||||| ||||||| || |||| ||||| || || || ||||| Sbjct 21783 AGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTTCG 21724 Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837 ||||||| || || |||| || || || || || || || ||||||||||||| Sbjct 21723 ACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGA 21664 Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897 |||| || || ||| || || | ||| ||| | |||||| || ||| || | | | Sbjct 21663 GCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAAGCTTTTGCG 21604 Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CCGGTATAGAGCATGTC 221955 || | |||| ||||| | ||||| |||||| || | | | || || | Sbjct 21603 CGGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTATTTCTCGAACAGGGCGCGG- 21548 Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015 |||| ||| || || | |||| ||||| || |||||| || | ||| ||| Sbjct 21547 -AACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGGGGCCA 21489 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 || | | | | ||| | || ||||||||| || |||||||| ||||| ||||| Sbjct 21488 GTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAG 21429 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | | || |||||| ||||| ||| || | || |||| |||||||| | Sbjct 21428 ATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGAC 21369 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 ||| |||||||| ||||| || |||| || | || ||||| |||||||||||||| || Sbjct 21368 GTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTG 21309 Query 222196 ATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCG 222255 || || | | | | |||| ||| || || | || || | ||||| || Sbjct 21308 GTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTA 21249 Query 222256 ACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGA 222314 ||||| ||||| ||||| | ||| || | | ||| ||| | || |||| Sbjct 21248 GCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGA 21190 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 ||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || | Sbjct 21189 TACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGA 21130 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434 | || || ||||| | | | ||| || || ||||| | ||| | | | | | || Sbjct 21129 TCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCGG 21070 Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494 |||| || || || || |||||| |||||||||| | ||||| || | ||||| || Sbjct 21069 CGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGACT 21010 Query 222495 CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554 | ||| | |||||| || ||||| || | |||| | |||| ||||| | Sbjct 21009 GCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTT 20950 Query 222555 GGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 | || | || | |||| | | | || |||| ||||| || || ||||| Sbjct 20949 GCGGTCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTT 20892 Query 222613 GAACCCAAAGTAGTTG 222628 ||| |||||||||||| Sbjct 20891 GAAGCCAAAGTAGTTG 20876 >seq24 Length=1584903 Score = 111 bits (122), Expect = 3e-19 Identities = 166/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||| | |||||| || ||| ||||||||||||| ||||| Sbjct 312663 ATCTGGGCCATGTACAAACAAGCTCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGATCTC 312604 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| | Sbjct 312603 GGCAACGACCTCTACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATTG 312546 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | ||||| | || ||||| || || || ||||| | ||||| ||||||||| ||||| Sbjct 312545 CGCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGCGTCGTGAATGAGAATCTGGTCGAGA 312486 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || ||||||| || ||||| | ||| ||||| || || ||||| Sbjct 312485 GGTTCTCAAGTGAGGTGCAGTTCGCCGAGGCGAGGTGCTTCTATGGCTTTCAGAT 312431 >seq39 Length=984724 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/199 (70%), Gaps = 7/199 (4%) Strand=Plus/Plus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567 ||||||||||||||||| || || ||||||||||| | | |||| | |||| | Sbjct 93229 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCATGACTGGGATAACAAGCTCAAG 93288 Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 || ||||| | | || || | |||| | || || || || ||||| || || | Sbjct 93289 CCC--GACGAACGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 93346 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | || |||||||| || |||| ||||| | | || || |||| || |||||| | Sbjct 93347 TCGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCCGCTGAGGCCCGAT 93406 Query 25688 GTTTCTACGGTTTCCAGAT 25706 | |||||||||||||| || Sbjct 93407 GCTTCTACGGTTTCCAAAT 93425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844312356480