Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq25 87.8 1e-11 >seq25 Length=1823320 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | | ||| || |||||||| || ||||| || ||||||||| Sbjct 1053909 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1053968 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| || ||||||||||||||||| ||||| ||||| || || Sbjct 1053969 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCC 1054028 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || || || || || ||||| | ||||| ||||| ||||| Sbjct 1054029 GACGACTCGA-CCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTG 1054084 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | | ||| || |||||||| || ||||| || ||||||||| Sbjct 1054137 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1054196 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| || ||||||||||||||||| ||||| ||||| || || Sbjct 1054197 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCC 1054256 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || || || || || || ||||| | ||||| ||||| ||||| Sbjct 1054257 GACGACTCGA-CCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTG 1054312 Score = 86.0 bits (94), Expect = 4e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | | ||| || |||||||| || ||||| || ||||||||| Sbjct 1053681 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1053740 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 || || || ||||| || ||||||||||||||||| Sbjct 1053741 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTT 1053775 Score = 86.0 bits (94), Expect = 4e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || || || | | ||| || |||||||| || ||||| || ||||||||| Sbjct 1054821 TTGTAATCTGCGAGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGT 1054880 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 || || || ||||| || ||||||||||||||||| Sbjct 1054881 TGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTT 1054915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177398416216