Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq25 159 4e-34
seq17 116 4e-21
seq39 114 2e-20
seq24 82.4 9e-11
>seq25
Length=1823320
Score = 159 bits (176), Expect = 4e-34
Identities = 546/848 (64%), Gaps = 11/848 (1%)
Strand=Plus/Plus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
||||| ||||||| ||||| ||||||||||||| | ||||| || |||||| ||
Sbjct 20953 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21012
Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338
| ||| || ||||| | | || | ||||| | || || |||||||| || |
Sbjct 21013 CGTACAACCTCATGTCGGAGCGCTACTTTACCCACGCCTCGCCGACACTCTTCAACGCCG 21072
Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398
| || || |||||| | || |||||||| || | | ||||| || || |||
Sbjct 21073 GAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATCG 21132
Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458
| || ||||| | || || | | ||| |||| ||||| ||| || || ||||| |
Sbjct 21133 AAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCG 21192
Query 75459 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 75518
| || |||||| | | | || | ||| || || || || || | |
Sbjct 21193 GTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACT 21252
Query 75519 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578
| | || || | || ||||| || || | ||| || |||||||| || | ||||
Sbjct 21253 CGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAAG 21312
Query 75579 CGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATA 75632
|| ||||| | || || ||||| ||||| | || || ||||| |||||
Sbjct 21313 GTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGACG 21369
Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692
|| | |||||||| || | || ||||| || | || || | || | | ||||
Sbjct 21370 TCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATC 21429
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
|||| | | || ||||| || || || |||||| |||| || |||| | || | |
Sbjct 21430 TCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCGACT 21489
Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812
|| | || ||||| || | | | || || || ||| ||| | || || |||||
Sbjct 21490 GGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGTTCC 21549
Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG 75872
||||| | | || || ||| ||||||| | ||||| ||| | || || ||
Sbjct 21550 GCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-GCAA 21608
Query 75873 ATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931
| | ||||| | || |||||| | | ||| || || || | || | ||||| |||
Sbjct 21609 AAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTAC 21668
Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991
||||| || |||||||| ||||||||||| | || || |||||| || ||
Sbjct 21669 AAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAAC 21728
Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051
|| ||||| ||||| | |||||| | | ||| ||| || || ||||| |||||
Sbjct 21729 CTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCC 21788
Query 76052 TCAATCGC 76059
|| |||||
Sbjct 21789 TCGATCGC 21796
>seq17
Length=1685150
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177747 AATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCC 177806
||||||| | || |||||| ||| || | ||| || ||||||||||| | ||| ||
Sbjct 61392 AATCTTCCTCGTCACAAAGGTACGACCACGACGCGGGGACTCGTGGTTGAACAAGATACC 61333
Query 177807 GGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAA 177866
| ||| || ||||| | || || || ||||| || ||||||| |||| ||| |||
Sbjct 61332 GTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAA 61273
Query 177867 TTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTC 177926
|||| ||| || || || || ||||||||||| ||| ||| | ||| || || ||
Sbjct 61272 CTTGGCGACTCCGTAAGGTGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGGTCTC 61213
Query 177927 TCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || ||| ||| ||| || || |||||||||||
Sbjct 61212 GACGACCTTGCCATACAACTCGGAGGTCGAGGCTTGGTA 61174
>seq39
Length=984724
Score = 114 bits (126), Expect = 2e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||||||| | || || | || || ||||||||||||||||| |||
Sbjct 270722 ATCTTTCTGGTGACAAAGGTGCGGCCACGACGGGGGGACTCGTGGTTGAAGAGGATACCG 270781
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| | || || || ||||| || ||||||| |||| ||| |||
Sbjct 270782 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 270841
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 270842 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 270901
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || ||||| |||||
Sbjct 270902 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 270939
>seq24
Length=1584903
Score = 82.4 bits (90), Expect = 9e-11
Identities = 229/341 (67%), Gaps = 14/341 (4%)
Strand=Plus/Plus
Query 13561 CAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--AAGTGTACTCTCATT 13618
|||| | || || ||||| || || |||||| | | | || ||||| || |||||
Sbjct 560741 CAAGCTCGAAGATGCGAATAACGCTGGTACG--AGGAACGGGTCCAAGTGCACACTCATC 560798
Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678
| || || || ||||| || || | ||||| || ||||||| ||||||| |||||
Sbjct 560799 TTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCTGTCGTCGGTCGA 560858
Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAG-AATGTTCGGGACGCTTCGGT 13737
|| |||| ||||| ||||| | || || ||| || || || || || || |||
Sbjct 560859 GACAACTATGGTGTCTTCCCTTTGCGAGG-AAAGCTACTCAACGTGCGTGAAGCGGCGG- 560916
Query 13738 GGCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAGATCCTTGGTCTTC 13793
||| ||| | | || | | ||| ||||| ||||| ||| ||||| | ||||| |
Sbjct 560917 -GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAGATCTTAGGTCTGC 560973
Query 13794 AACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGA 13853
| || || |||| ||| || || || || || || || ||||| |||
Sbjct 560974 AGCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAGCTCATGATCATGG 561033
Query 13854 CAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894
| ||| ||| | ||||| || |||||||||||||| |||
Sbjct 561034 CCGATCAAGATCACGATGGATCGCACATCAAGGGTCTGATC 561074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569286800960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |