Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq25 159 4e-34 seq17 116 4e-21 seq39 114 2e-20 seq24 82.4 9e-11 >seq25 Length=1823320 Score = 159 bits (176), Expect = 4e-34 Identities = 546/848 (64%), Gaps = 11/848 (1%) Strand=Plus/Plus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| ||||||| ||||| ||||||||||||| | ||||| || |||||| || Sbjct 20953 ACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGT 21012 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| || ||||| | | || | ||||| | || || |||||||| || | Sbjct 21013 CGTACAACCTCATGTCGGAGCGCTACTTTACCCACGCCTCGCCGACACTCTTCAACGCCG 21072 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | || || |||||| | || |||||||| || | | ||||| || || ||| Sbjct 21073 GAACGCCTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATCG 21132 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 | || ||||| | || || | | ||| |||| ||||| ||| || || ||||| | Sbjct 21133 AAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCG 21192 Query 75459 GGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAAT 75518 | || |||||| | | | || | ||| || || || || || | | Sbjct 21193 GTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACT 21252 Query 75519 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578 | | || || | || ||||| || || | ||| || |||||||| || | |||| Sbjct 21253 CGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAAG 21312 Query 75579 CGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATA 75632 || ||||| | || || ||||| ||||| | || || ||||| ||||| Sbjct 21313 GTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGACG 21369 Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692 || | |||||||| || | || ||||| || | || || | || | | |||| Sbjct 21370 TCTTTGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATC 21429 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 |||| | | || ||||| || || || |||||| |||| || |||| | || | | Sbjct 21430 TCTTCTTTGCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCGACT 21489 Query 75753 GGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTG 75812 || | || ||||| || | | | || || || ||| ||| | || || ||||| Sbjct 21490 GGCCCCTGTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGTTCC 21549 Query 75813 AAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG 75872 ||||| | | || || ||| ||||||| | ||||| ||| | || || || Sbjct 21550 GCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC-GCAA 21608 Query 75873 ATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTAC 75931 | | ||||| | || |||||| | | ||| || || || | || | ||||| ||| Sbjct 21609 AAGCTTTGGTACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTAC 21668 Query 75932 AAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAAT 75991 ||||| || |||||||| ||||||||||| | || || |||||| || || Sbjct 21669 AAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAAC 21728 Query 75992 CTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCA 76051 || ||||| ||||| | |||||| | | ||| ||| || || ||||| ||||| Sbjct 21729 CTGTGCACCGAAATCATCGAGTACTCCGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCC 21788 Query 76052 TCAATCGC 76059 || ||||| Sbjct 21789 TCGATCGC 21796 >seq17 Length=1685150 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177747 AATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCC 177806 ||||||| | || |||||| ||| || | ||| || ||||||||||| | ||| || Sbjct 61392 AATCTTCCTCGTCACAAAGGTACGACCACGACGCGGGGACTCGTGGTTGAACAAGATACC 61333 Query 177807 GGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAA 177866 | ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 61332 GTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAA 61273 Query 177867 TTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTC 177926 |||| ||| || || || || ||||||||||| ||| ||| | ||| || || || Sbjct 61272 CTTGGCGACTCCGTAAGGTGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGGTCTC 61213 Query 177927 TCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || ||| ||| ||| || || ||||||||||| Sbjct 61212 GACGACCTTGCCATACAACTCGGAGGTCGAGGCTTGGTA 61174 >seq39 Length=984724 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||||||| | || || | || || ||||||||||||||||| ||| Sbjct 270722 ATCTTTCTGGTGACAAAGGTGCGGCCACGACGGGGGGACTCGTGGTTGAAGAGGATACCG 270781 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 270782 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 270841 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 270842 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 270901 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 270902 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 270939 >seq24 Length=1584903 Score = 82.4 bits (90), Expect = 9e-11 Identities = 229/341 (67%), Gaps = 14/341 (4%) Strand=Plus/Plus Query 13561 CAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA--AAGTGTACTCTCATT 13618 |||| | || || ||||| || || |||||| | | | || ||||| || ||||| Sbjct 560741 CAAGCTCGAAGATGCGAATAACGCTGGTACG--AGGAACGGGTCCAAGTGCACACTCATC 560798 Query 13619 GTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGT 13678 | || || || ||||| || || | ||||| || ||||||| ||||||| ||||| Sbjct 560799 TTGACCGAAGGAGATTCCGCCAAGGCGCTCGCCGTCTCGGGTCTGGCTGTCGTCGGTCGA 560858 Query 13679 GATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAG-AATGTTCGGGACGCTTCGGT 13737 || |||| ||||| ||||| | || || ||| || || || || || || ||| Sbjct 560859 GACAACTATGGTGTCTTCCCTTTGCGAGG-AAAGCTACTCAACGTGCGTGAAGCGGCGG- 560916 Query 13738 GGCACAGCTCACATCAAACCAG--GAG-TTCAA-CGATCTCAAGAAGATCCTTGGTCTTC 13793 ||| ||| | | || | | ||| ||||| ||||| ||| ||||| | ||||| | Sbjct 560917 -GCAAAGCCCTCCTCGACAATGCCGAGATTCAAGCGATC--AAGCAGATCTTAGGTCTGC 560973 Query 13794 AACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGA 13853 | || || |||| ||| || || || || || || || ||||| ||| Sbjct 560974 AGCAGGGCAAAGTTTACACCGACGTCGACTCGCTCCGTTACGGCAAGCTCATGATCATGG 561033 Query 13854 CAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 | ||| ||| | ||||| || |||||||||||||| ||| Sbjct 561034 CCGATCAAGATCACGATGGATCGCACATCAAGGGTCTGATC 561074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569286800960