Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq32 91.5 4e-13 >seq32 Length=1139524 Score = 91.5 bits (100), Expect = 4e-13 Identities = 177/258 (69%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 302561 CAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATG 302620 ||| ||||| ||||| | ||||| | |||||| || || || || || || | Sbjct 279345 CAACCATAACATCTTCGAGGGCCTTGACGAGACGACGTTGGATGTACCCCGTCTCAGCCG 279286 Query 302621 TTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTT 302680 | || || || |||||||| | || | || || |||| || |||||||| | ||||| Sbjct 279285 TCTTGACGGCCGTATCAATCAATCCTTCTCGTCCGGCCATGGCGTGGAAGAAGAACTCTT 279226 Query 302681 CCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 |||| || | || | ||| | | || | ||||||||||| | ||| |||||||| | Sbjct 279225 GCGGT-GTCAAACCTCGCAAGTACG-AGTTTTCAACGAAACCCCTCGCTTCGGGCGAGTA 279168 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 ||| ||||||||| || |||| ||| | | || | || | || | ||| || || Sbjct 279167 ATCGTCCTTGGTAAAATGGGGCAAGGTACGATGCTTGAACCCAAACGGCACACGTTTGCC 279108 Query 302799 ATCAACGTTCTGCTGTCC 302816 || ||| |||| ||||| Sbjct 279107 CTCGACGATCTGTTGTCC 279090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816807978154