Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq25 228 1e-53
seq20 129 7e-24
>seq25
Length=1823320
Score = 228 bits (252), Expect = 1e-53
Identities = 287/393 (73%), Gaps = 17/393 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| || | ||| |||| ||||||||||| |||| |||||| ||
Sbjct 21310 TGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 21251
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||| | ||||| ||||| | ||||| | || |||
Sbjct 21250 TAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 21191
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 21190 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCG 21131
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| || ||||||| || || ||||||||||| |||||||| | ||| |||
Sbjct 21130 ATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCG 21071
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GGT 1630364
||||||||||| || |||| || ||| || | || ||||||| || ||| |
Sbjct 21070 GCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGAC 21011
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 21010 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGACGGCGAC 20967
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457
|||||||||||||| || || || ||| ||||
Sbjct 20966 GCGCATGAGCATGTGTTGCGGTCGTTCGGCGAC 20934
Score = 129 bits (142), Expect = 7e-24
Identities = 289/440 (66%), Gaps = 2/440 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || ||| |||||||||||||| | |||| | |||| || ||||||| ||||| |
Sbjct 21750 ACTCGATGATTTCGGTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCG 21691
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
|| ||| |||||||||||| ||||||| | || |||||| |||| ||| |||
Sbjct 21690 ATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCT 21631
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| || || |||| | || ||||||| | || | || ||||||||||
Sbjct 21630 CGAGAATCGCGTACCAAAGCTTTTGCGCGGGGATCGTCT-TCTTGGCGCGGCCCTCCTTT 21572
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| | |||| || ||||| |||||||| ||
Sbjct 21571 TCGTATTTCTCGAACAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCT 21512
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
|||| || || || || | ||||||||| ||| | | | || ||| ||||| ||
Sbjct 21511 TCGGCGGGGCAGAACAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCG 21452
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||| || || | ||||| || || || ||| ||||||||||||||||||||
Sbjct 21451 GGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTG 21392
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580
||||| || | || | | |||||||||||| ||||| |||||| || |||||
Sbjct 21391 CGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCT 21332
Query 1628581 CCCTTGCGCTTGCCGCCGCC 1628600
|| |||||| ||| ||
Sbjct 21331 CCGGGACGCTTGTTGCCACC 21312
Score = 122 bits (134), Expect = 1e-21
Identities = 173/241 (72%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| || ||||||| |||||||||||
Sbjct 22924 TGGTCGACGGTGAACTTGATCGCCCCGACGGCGGCCCGTGTGCGCAAGTAGTACATGCCC 22865
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
|| || || || || ||| ||||| |||||||||||||| || | ||||| |
Sbjct 22864 GTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTCGGG 22805
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||||| ||| | || ||||| |
Sbjct 22804 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCGATGAAGGCACCTCGGTCGGCGGA 22746
Query 1627161 CATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTC 1627220
|| ||| ||| || | | | | |||||| ||||||||| ||||||||||||| ||
Sbjct 22745 CAAGTCAATGATGGTCTTTTGCGAGAGCTCCCAAACGGTCTTGTAGATGGCCTTGAGATC 22686
Query 1627221 G 1627221
|
Sbjct 22685 G 22685
Score = 100 bits (110), Expect = 3e-15
Identities = 103/132 (78%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 1531394 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCTGTG 1531453
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | |||||||||||||||||||| || || ||||||||
Sbjct 1531454 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCCATGCTGTCGATTCCCGCAACCAAGGG 1531512
Query 19172 ATTCGAGATTGG 19183
|||||||||||
Sbjct 1531513 TTTCGAGATTGG 1531524
Score = 91.5 bits (100), Expect = 2e-12
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
||||||| || ||||| ||||||| |||| || | | || || || || |
Sbjct 1450964 TCGACGTTGTACGCAACCGCATCAAGGCTTTCGCCCAGAAAAAGGTCACACTCCCACCGG 1450905
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||||| | || ||| |||||||| |
Sbjct 1450904 GTCGCCACAAGCTCGTCATCCTCGACGAAGCCGACTCGATGACCCCGGGAGCCCAGCAAG 1450845
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || ||||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 1450844 CGCTCCGCAGGACGATGGAAATCTTCTCCAACACCACCCGCTTCGCCTTTGCGTGCAACC 1450785
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | |||||||| | | |||||||| ||||||||
Sbjct 1450784 AGAGCAACAAAATCATCGAGCCGATTCAAAGTCGATGCGCCAT 1450742
>seq20
Length=1821730
Score = 129 bits (142), Expect = 7e-24
Identities = 151/203 (74%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 624155 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 624214
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| ||||||| ||||
Sbjct 624215 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGACGCCTCGGTGGCGATGCGCTCGA 624271
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | |||||| |||||| ||||| || |||||
Sbjct 624272 AGATGTCGTTGACGAACGAGTTGAGGATCAACATCGCCTTGTTCGAGATACCGGTGTCGG 624331
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 624332 GGTGGACCTGCTTCAACACCTTG 624354
Score = 129 bits (142), Expect = 7e-24
Identities = 151/203 (74%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 674346 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 674287
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| ||||||| ||||
Sbjct 674286 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGACGCCTCGGTGGCGATGCGCTCGA 674230
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || | |||||| |||||| ||||| || |||||
Sbjct 674229 AGATGTCGTTGACGAACGAGTTGAGGATCAACATCGCCTTGTTCGAGATACCGGTGTCGG 674170
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| |||||||| | |||||||
Sbjct 674169 GGTGGACCTGCTTCAACACCTTG 674147
Score = 105 bits (116), Expect = 8e-17
Identities = 146/203 (72%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| ||| | | ||||| ||| || | ||| |||||||| |||| ||
Sbjct 308464 GCTTGGACAATTCTCCGGGGAGGATCAAGCGAACCGAGGTTTGGATCTCTCGCGACGAGA 308405
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
| || ||||| |||| || ||| || | ||||||||| |||| || ||||
Sbjct 308404 TGGTCGACTTGCGGTTGT---AGCCCGCGAGCTTGGATGCCTCGGTGGCGATACGCTCGA 308348
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| |||||
Sbjct 308347 AGATGTCGTTGACGAACGAGTTGAGGATAAGCATCGCCTTGTTCGAGATACCCGTGTCGG 308288
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||||| | ||| |||
Sbjct 308287 GGTGAACTTGCTTCAACACTTTG 308265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107135753283314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |