Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq25 123 2e-23
>seq25
Length=1823320
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| || || ||||| || ||||| || || || | |||||
Sbjct 1053416 ACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 1053475
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || |||||||| | ||||||| ||||| || || ||||||||||| ||
Sbjct 1053476 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTT 1053535
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| || || || ||||| | || | ||||| ||| || || || || || |
Sbjct 1053536 GTCTTG-GATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGA 1053594
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || ||||| || |||||
Sbjct 1053595 TTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1053631
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| || || || || || || || ||||| || || || | |||||
Sbjct 1054328 ACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 1054387
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || ||||| ||| | ||||||| ||||| || || ||||||||||| ||
Sbjct 1054388 ATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTT 1054447
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| || || || ||||| | || | ||||| || || || || || || |
Sbjct 1054448 GTCTTG-GATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 1054506
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||| || || || || |||||
Sbjct 1054507 TCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1054543
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| || || || || || || || ||||| || || || | |||||
Sbjct 1054556 ACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 1054615
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || ||||| ||| | ||||||| ||||| || || ||||||||||| ||
Sbjct 1054616 ATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTT 1054675
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| || || || ||||| | || | ||||| ||| || || || || || |
Sbjct 1054676 GTCTTG-GATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGA 1054734
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || ||||| || |||||
Sbjct 1054735 TTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1054771
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| || || || || || ||||||||||| |||||||| | || ||
Sbjct 1296147 ACGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCCGCGAGCGTACGGCC 1296206
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || ||||| ||||| ||
Sbjct 1296207 ATCCTCGAGTTGCTTGCCCGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 1296266
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| ||||| | || | ||||| || || || || || || ||
Sbjct 1296267 GTCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 1296326
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | ||| || ||||| || |||||
Sbjct 1296327 CGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 1296362
Score = 109 bits (120), Expect = 4e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| |||||| || || || || || ||||||||||| || || || | |||||
Sbjct 1293867 ACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCC 1293926
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || ||||| ||||| ||
Sbjct 1293927 ATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 1293986
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||| || || || || || || |
Sbjct 1293987 GTCCTG-AATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGA 1294045
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||| || || || || |||||
Sbjct 1294046 TCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294082
Score = 109 bits (120), Expect = 4e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| |||||| || || || || || ||||||||||| || || || | |||||
Sbjct 1294095 ACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCC 1294154
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || ||||| ||||| ||
Sbjct 1294155 ATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 1294214
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||| || || || || || || |
Sbjct 1294215 GTCCTG-AATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGA 1294273
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||| || || || || |||||
Sbjct 1294274 TCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294310
Score = 109 bits (120), Expect = 4e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| |||||| || || || || || ||||||||||| || || || | |||||
Sbjct 1294551 ACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCC 1294610
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || ||||| ||||| ||
Sbjct 1294611 ATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 1294670
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | ||||| || || || || || || |
Sbjct 1294671 GTCCTG-AATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGA 1294729
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || ||||| || || || || |||||
Sbjct 1294730 TCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294766
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| |||||| || || || || || ||||||||||| || || || | |||||
Sbjct 1295919 ACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCC 1295978
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || ||||| ||||| ||
Sbjct 1295979 ATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 1296038
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||| | || | ||||| || || || || || || ||
Sbjct 1296039 GTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 1296098
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || ||||| || ||||| || |||||
Sbjct 1296099 CGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1296134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219002815922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |