Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq25 93.3 1e-13
seq38 86.0 1e-11
>seq25
Length=1823320
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| ||||| || || || || ||||| | || || || ||| |||
Sbjct 1053628 CAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 1053569
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || || || ||| || ||| ||
Sbjct 1053568 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 1053509
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | |||||||| || |||||| | || ||||| | || | ||||| |||||| ||
Sbjct 1053508 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1053449
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||||||||| || ||||||
Sbjct 1053448 CAGAAAGAGTCGACCCTTCAC 1053428
>seq38
Length=1003587
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || ||||| || |||||||| | || || || || ||||| ||||
Sbjct 148960 CAAGACTCTTACAGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 149019
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||| || || ||| ||| | || |||||
Sbjct 149020 CGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAACGTCTCATCTT 149079
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| |||||| | || ||||| | || | |||||||||||| |||| || |||||
Sbjct 149080 TGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATCCAAAAGGAGTC 149139
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 149140 GACCCTCCAC 149149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820164032682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |