Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25 93.3 1e-13 seq38 86.0 1e-11 >seq25 Length=1823320 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| ||||| || || || || ||||| | || || || ||| ||| Sbjct 1053628 CAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 1053569 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || ||| || ||| || Sbjct 1053568 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 1053509 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || |||||| | || ||||| | || | ||||| |||||| || Sbjct 1053508 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1053449 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || |||||| Sbjct 1053448 CAGAAAGAGTCGACCCTTCAC 1053428 >seq38 Length=1003587 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || ||||| || |||||||| | || || || || ||||| |||| Sbjct 148960 CAAGACTCTTACAGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 149019 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| || || ||| ||| | || ||||| Sbjct 149020 CGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAACGTCTCATCTT 149079 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||| | || ||||| | || | |||||||||||| |||| || ||||| Sbjct 149080 TGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATCCAAAAGGAGTC 149139 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 149140 GACCCTCCAC 149149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820164032682