Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq25 86.0 6e-12
>seq25
Length=1823320
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| |||||||||||||||||| | || || |
Sbjct 1293868 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1293927
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1293928 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1293987
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1293988 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1294047
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1294048 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294082
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| |||||||||||||||||| | || || |
Sbjct 1294096 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1294155
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1294156 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1294215
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1294216 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1294275
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1294276 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294310
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| |||||||||||||||||| | || || |
Sbjct 1294552 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1294611
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1294612 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1294671
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1294672 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1294731
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1294732 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294766
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 148255 TCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCG 148314
|||||||||| ||||| ||||| | |||||||||||||||||||| || |||||||||
Sbjct 20998 TCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTCGTTCG 20939
Query 148315 GCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTAC 148374
|| || | || ||| || | ||| ||||| || ||| | ||||||||
Sbjct 20938 GCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTTGAAGCCAAAGTAG 20879
Query 148375 TTGTAATCAAAATCTAGCTCGTA 148397
||||| | ||||| | |||||
Sbjct 20878 TTGTAGCCGAAATCGCGATCGTA 20856
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1293640 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1293699
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1293700 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1293759
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1293760 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1293819
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1293820 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1293854
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1294324 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1294383
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1294384 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1294443
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1294444 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1294503
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1294504 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294538
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1294780 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1294839
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1294840 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1294899
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1294900 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1294959
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1294960 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294994
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1295008 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1295067
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1295068 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1295127
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1295128 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1295187
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1295188 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1295222
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1295236 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1295295
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1295296 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1295355
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1295356 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1295415
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1295416 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1295450
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1295464 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1295523
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1295524 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1295583
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1295584 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1295643
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1295644 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1295678
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | | ||||| || || |||||||||||| | || || |
Sbjct 1295692 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1295751
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1295752 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1295811
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | || | || || | | ||| || |||| ||| | |
Sbjct 1295812 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1295871
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || |||| || || | ||| || |||||
Sbjct 1295872 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1295906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610949779120
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