Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq25 125 6e-24
seq24 105 6e-18
seq38 98.7 9e-16
>seq25
Length=1823320
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || |||||||| |||||
Sbjct 1054317 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1054376
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| |||||||| ||||| ||||||||||| | |||
Sbjct 1054377 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGA 1054436
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||||| |||||| ||| | |||| | | |||||| ||| || ||
Sbjct 1054437 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGAC 1054495
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||||||| || || ||||| || || || || || |||||
Sbjct 1054496 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1054543
Score = 122 bits (134), Expect = 8e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||||||||| || | || |||||||||||||||||| ||||| | || || | ||
Sbjct 1295922 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1295981
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| || ||||| |||||||| || | || || ||||| | |||| || |||||||||
Sbjct 1295982 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1296041
Query 35644 CATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702
| |||||| ||| | |||| | | |||||| || || ||||| | ||||||||
Sbjct 1296042 CTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCG 1296100
Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || ||||| || || ||||| || |||||
Sbjct 1296101 TCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1296134
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || |||||||| |||||
Sbjct 1054545 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1054604
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| |||||||| ||||| ||||||||||| | |||
Sbjct 1054605 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGA 1054664
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||||| |||||| ||| | |||| | | |||||| || || ||
Sbjct 1054665 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGAC 1054723
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || ||||||| || || ||||| || |||||
Sbjct 1054724 CTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1054771
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||||||||| || | || |||||||||||||||||| ||||| | || || | ||
Sbjct 1293870 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1293929
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| || ||||| |||||||| || | || || ||||| | |||| || |||||||||
Sbjct 1293930 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1293989
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| ||||| ||| | | | | | |||||| || || ||||| | |||||||||
Sbjct 1293990 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1294049
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||| || || || || || |||||
Sbjct 1294050 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294082
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||||||||| || | || |||||||||||||||||| ||||| | || || | ||
Sbjct 1294098 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1294157
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| || ||||| |||||||| || | || || ||||| | |||| || |||||||||
Sbjct 1294158 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1294217
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| ||||| ||| | | | | | |||||| || || ||||| | |||||||||
Sbjct 1294218 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1294277
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||| || || || || || |||||
Sbjct 1294278 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294310
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
||||||||| || | || |||||||||||||||||| ||||| | || || | ||
Sbjct 1294554 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1294613
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| || ||||| |||||||| || | || || ||||| | |||| || |||||||||
Sbjct 1294614 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1294673
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| ||||| ||| | | | | | |||||| || || ||||| | |||||||||
Sbjct 1294674 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1294733
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || ||||| || || || || || |||||
Sbjct 1294734 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1294766
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || ||||||||||||||||||||| || | || || | || ||
Sbjct 1296153 CACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCCGCGAGCGTACGGCCATCCTC 1296212
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| ||||| |||||||| || | || || ||||| | |||| || ||||||||||
Sbjct 1296213 GAGTTGCTTGCCCGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 1296272
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
||| ||| || | |||| | | |||||| || || ||||| | ||||||||| |
Sbjct 1296273 GAT-TTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 1296331
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||| || || ||||| || |||||
Sbjct 1296332 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 1296362
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || ||| || || |||||||| |||||
Sbjct 1053405 CCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1053464
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || || || ||||| ||||||||||| | |||
Sbjct 1053465 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 1053524
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||||| |||||| ||| | |||| | | |||||| || || ||
Sbjct 1053525 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGAC 1053583
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || ||||||| || || ||||| || |||||
Sbjct 1053584 CTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1053631
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || ||||||||||| ||
Sbjct 1053861 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1053920
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || ||||| |||||||| || | || || ||||| | |||
Sbjct 1053921 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1053980
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| ||| || ||
Sbjct 1053981 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGAC 1054039
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||||||| || || ||||| || || || || || |||||
Sbjct 1054040 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1054087
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || ||||||||||| ||
Sbjct 1054089 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1054148
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || ||||| |||||||| || | || || ||||| | |||
Sbjct 1054149 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1054208
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| ||| || ||
Sbjct 1054209 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGAC 1054267
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||||||| || || ||||| || || || || || |||||
Sbjct 1054268 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1054315
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || ||||||||||| ||
Sbjct 1053633 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1053692
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || ||||| |||||||| || | || || ||||| | |||
Sbjct 1053693 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1053752
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| || || ||
Sbjct 1053753 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCTGAAGACTCGAC 1053811
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | |||||| || || || ||||| || || ||||| || |||||
Sbjct 1053812 CTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1053859
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || ||||||||||| ||
Sbjct 1054773 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1054832
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || ||||| |||||||| || | || || ||||| | |||
Sbjct 1054833 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1054892
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| || || ||
Sbjct 1054893 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGAC 1054951
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||||| || || || |||| || || ||||| ||||||||
Sbjct 1054952 CTCGAGTGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 1054999
>seq24
Length=1584903
Score = 105 bits (116), Expect = 6e-18
Identities = 161/227 (71%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| ||||||||| ||||||||||||||
Sbjct 1347353 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCG 1347412
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || |||||||| || ||||| || | || |||||||| | ||
Sbjct 1347413 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 1347472
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || |||||||| |||||| ||| | |||| | | ||||||| ||| || ||
Sbjct 1347473 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 1347531
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
||| | ||||| || || ||||| | || || || || || ||||
Sbjct 1347532 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1347578
>seq38
Length=1003587
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||||||||| |||||||||||||| | || || | || || |||||||| || |||||
Sbjct 149137 CTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 149078
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || |||||||| | || | || |||||||| |||||| ||| | ||
Sbjct 149077 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 149019
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||||| ||| || ||||| | |||||||| || || || | ||| || |
Sbjct 149018 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCTGTAAGAGTCTTGA 148959
Query 35724 CAAATATCTGC 35734
| || || |||
Sbjct 148958 CGAAGATTTGC 148948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793363333360
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