Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25 100 2e-16 >seq25 Length=1823320 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1295908 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1295967 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1295968 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1296027 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | || || || Sbjct 1296028 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 1296087 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || ||||||||||||||| Sbjct 1296088 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 1296135 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||| || || || | || | ||||| || | || || ||||| || || ||||| Sbjct 1053398 TTATTGACCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTA 1053457 Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 |||| | |||| | || |||||||| || || ||| | || | ||||| || || Sbjct 1053458 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTC 1053517 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 || || | |||||| || || ||||||| | || | | | || | ||||| | | Sbjct 1053518 TGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGA 1053577 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || | ||||||||||| || || ||||||||||||||| Sbjct 1053578 CTCGACCTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCATA 1053632 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1293856 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1293915 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1293916 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1293975 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1293976 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1294035 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1294036 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294083 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1294084 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1294143 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1294144 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1294203 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1294204 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1294263 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1294264 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1294540 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1294599 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1294600 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1294659 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1294660 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1294719 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1294720 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294767 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||||||| | |||| | || ||| Sbjct 1054563 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCG 1054622 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || || | || | ||||| || || || || | |||||| || || | Sbjct 1054623 AGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 1054682 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | | || | ||||| | | || || || || || || | ||| Sbjct 1054683 ATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGTCTTG 1054742 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| || || ||||||||||||||| Sbjct 1054743 CCCGTCAGCGTCTTGACAAAGATTTGCATA 1054772 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1293628 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1293687 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1293688 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1293747 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1293748 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1293807 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1293808 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1293855 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1294312 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1294371 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1294372 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1294431 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1294432 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1294491 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1294492 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294539 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1294768 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1294827 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1294828 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1294887 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1294888 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1294947 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1294948 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1294995 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1294996 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1295055 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1295056 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1295115 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1295116 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1295175 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1295176 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295223 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1295224 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1295283 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1295284 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1295343 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1295344 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1295403 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1295404 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295451 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1295452 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1295511 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1295512 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1295571 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1295572 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1295631 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1295632 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295679 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1295680 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1295739 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1295740 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1295799 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1295800 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1295859 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1295860 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1295907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934182486704