Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq25 215 6e-51
>seq25
Length=1823320
Score = 215 bits (238), Expect = 6e-51
Identities = 567/856 (66%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
||||| || |||| || || || | | ||| ||| | | |||||| || |||||
Sbjct 21796 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCG 21737
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
||||||| ||| || ||| || ||||| | ||||||||| || || || ||||
Sbjct 21736 GTGCACAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 21677
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| |||||| | || | || || || |||| || |||||| || | |
Sbjct 21676 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTAC 21617
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|| | | | || || || | || ||||| || ||||| | ||||| || | |
Sbjct 21616 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 21558
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
||||| |||||||| || | || ||| || || || | | ||||||||
Sbjct 21557 CAGGGCGCGGAACTCTTCGCCATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 21498
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
|| | ||| | || | |||| || |||| ||||||||| || ||||||||||||||
Sbjct 21497 CAGGGGCCAGTCGCCGGCGGCCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGC 21438
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 21437 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 21378
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 119185
|| | || || |||||||| || || ||||| | ||||| | || |||
Sbjct 21377 CTCAAAGACGTCGGCGTGCCAAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 21318
Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245
||| | |||| || || | ||| || ||| | ||||| ||||| || | ||| ||
Sbjct 21317 GCCACCTTGGTCGACGTAGCGCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCC 21258
Query 119246 ATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATG 119303
| || | ||| || || || ||| || ||| | | || | || | |||||||
Sbjct 21257 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 21200
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 21199 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 21140
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || |||||||| ||| |||| | | || |||||||| ||| | || ||
Sbjct 21139 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGA 21080
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483
|| || || ||||||||||| || || | |||||| | || | | ||||| |
Sbjct 21079 GGCGTTCCGGCGTTGAAGAGTGTCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGG 21020
Query 119484 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 21019 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 20961
Query 119543 AAACATGTATTGGGGT 119558
| ||||| ||| |||
Sbjct 20960 GAGCATGTGTTGCGGT 20945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434875321520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |