Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq25 475 4e-129 seq39 95.1 1e-14 >seq25 Length=1823320 Score = 475 bits (526), Expect = 4e-129 Identities = 781/1119 (70%), Gaps = 13/1119 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 22069 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 22013 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 22012 TCGGGTGAATCGAACGGCATCGCCAAGGC-CATGAATGCGTCGGCGAGACCTTGCACTCC 21954 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | ||||| | Sbjct 21953 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTG---CGCCTCGATGACGGGGTAGTA 21897 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| || |||| |||||||| ||| | ||||||| ||||||| || || Sbjct 21896 GTTAACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTT 21837 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 ||| || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 21836 CTTGAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 21778 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || |||||||||||| ||||||| || ||||||| Sbjct 21777 AGACGGCGCACTCGTCCGGCGCGGAGTACTCGATGATTTCGGTGCACAGGTTCGACGACT 21718 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 21717 TGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGA 21658 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 |||| | ||||| || ||||| || ||||| ||| ||| | | | || ||| Sbjct 21657 ACGGGTTGCCGGTTTCGACCTGGGCCTCGAGAATCGCGTACCAAAGCTTTTGCGCGGGGA 21598 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| || |||| |||| || | ||| || ||| | || | Sbjct 21597 TCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGC 21538 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 |||| || ||| | ||||| ||| ||| ||||| | |||| ||||||| || | Sbjct 21537 CATAAACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAACAGGGGCCAGTCGCCGGCGG 21478 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || |||||||| || || |||||| || || | Sbjct 21477 CCTCGACTCGCTCCATGAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGC 21418 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||||||||||| Sbjct 21417 GGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCAAAGACGTCGGCGTGCC 21358 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 | ||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 21357 AAGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 21298 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || || |||||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 21297 GCGCGGTATTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 21238 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 21237 CGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 21178 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||||||||| |||||||| || |||| Sbjct 21177 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCT 21118 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | |||||||||||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 21117 TCATCGTGACCAGGAAGCACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGTG 21058 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | ||| || | ||||| || | ||||||| Sbjct 21057 TCGGCGAGGCGTGGGTAAAGTAGCGCTCCGACATGAGGTTGTACGACTGCAAGACGCGCT 20998 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||||| |||||||||||||| ||||||||||||| Sbjct 20997 CGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGA 20959 Score = 448 bits (496), Expect = 5e-121 Identities = 778/1123 (69%), Gaps = 6/1123 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| || ||| ||| || | ||| Sbjct 20959 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 21018 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 21019 ACCTCATGTCGGAGCGCTACTTTACCCACGCCTCGCCGACACTCTTCAACGCCGGAACGC 21078 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| || ||||| || | ||||||||||| || || |||| Sbjct 21079 CTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATCGAAGGCA 21138 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| ||||||||| |||||||| |||||||||| |||| |||||||| | Sbjct 21139 TCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 21198 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || |||||||| || ||| | Sbjct 21199 GCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGC-TACTCGAAC 21257 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || |||||||| |||||||| |||| |||||| || || | |||||| |||| || ||| Sbjct 21258 GGCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAAGGTGGC 21317 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| |||||||||||||| |||||||| |||||| | || Sbjct 21318 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGACGTCTTTGAG 21377 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | ||||| | ||| ||| || |||||| Sbjct 21378 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTT 21437 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | ||||| || || || ||||||||| || ||| | || || |||| |||| Sbjct 21438 GCGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCGACTGGCCCCTG 21497 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| |||| ||| ||||| | ||| || || ||||| | |||| | || Sbjct 21498 TTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGTTCCGCGCCCTG 21557 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| ||||||| | ||| || | | | ||| Sbjct 21558 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 21617 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||| | ||| | ||||||||| ||||||| |||| |||| |||||||||||| Sbjct 21618 TA-CGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGC 21676 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||| ||| || || || || |||||| | ||| ||||||||||||| |||||||| || Sbjct 21677 CGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAACCTGTGCAC 21736 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 |||||||| ||| ||| |||||||||| ||||| || || |||| || | Sbjct 21737 CGAAATCATCGAGTACTCCGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 21796 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| ||||| | | | |||||| || || ||||||| | Sbjct 21797 GTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTCAAGAAGCTGCACGAGGTCGTCAA 21856 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGC 20073 ||||||| | || |||| ||| |||| || |||| ||||| | | ||| Sbjct 21857 GGTCGTCGCTTTCAACTTGAACCGCATCATTGACGTTAACTACTACCCCGTCATCGAGGC 21916 Query 20074 GCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGT 20133 || || || || | |||||||| || |||| ||||| || || || || ||||||| Sbjct 21917 GCAAAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGC 21976 Query 20134 TTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCA 20192 |||||| || ||| | | ||||| ||| |||||||| ||||||||||| | Sbjct 21977 ATTCATG-GCCTTGGCGATGCCGTTCGATTCACCCGAGGCGCGCAAGCTCAACAAGCAGA 22035 Query 20193 TCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 |||||||| || | |||||||| || || | |||||||| Sbjct 22036 TCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 22078 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 ||| ||||| ||||| |||||||||||||| || || || |||||| ||||| | ||| Sbjct 22892 GGCCCGTGTGCGCAAGTAGTACATGCCCGTTTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 22833 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || || | |||| ||||| || || | |||||||||||| || ||||| Sbjct 22832 CATCGACGTGAGTTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 22773 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | ||||| |||||||| | || ||| |||| | |||||||| | |||||| Sbjct 22772 GTCGATGAAGGCACCTCGGTCGGCGGACAAGTCAATGATGGTCTTTTGCGAGAGCTCCCA 22713 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 | |||| ||| |||||||| || || Sbjct 22712 AACGGTCTTGTAGATGGCCTTGAGATC 22686 Score = 125 bits (138), Expect = 8e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| |||||| ||| || | Sbjct 22689 CTCAAGGCCATCTACAAGACCGTTTGGGAGCTCTCGCAAAAGACCATCATTGACTTGTCC 22748 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| |||||||||||| || |||||||| || | || || ||| Sbjct 22749 GCCGACCGAGGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 22808 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| | || | || ||||| | ||||||||| | || || || |||||| Sbjct 22809 ACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAAACGGGC 22868 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 22869 ATGTACTACTTGCGCACACGGGCC 22892 >seq39 Length=984724 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 93917 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 93976 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 93977 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 94011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524512024480