Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12- 23] 42 sequences; 25,806,628 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq39 132 4e-26 >seq39 Length=984724 Score = 132 bits (146), Expect = 4e-26 Identities = 194/273 (71%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TACTCTGCTCC 30243 || |||||| |||||| |||| ||| || || | | |||| |||||||| || Sbjct 222285 CAACTGATCGACCCCCTCCCCCTGGTAATCATCCTT---GGCCGTTCTATACTCTGCGCC 222341 Query 30244 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30303 || ||||||||||||||||| || ||||| |||| || ||||||| ||| ||| | || Sbjct 222342 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 222401 Query 30304 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30363 || |||||||| || | ||| || || || | ||||| ||||| ||||||||||| Sbjct 222402 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 222461 Query 30364 AGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30423 || | ||| || | || || |||| |||||||| || || ||||| | || | Sbjct 222462 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 222521 Query 30424 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||| |||| || || | |||||| Sbjct 222522 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 222554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310192019864