Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq38 113 1e-19
seq24 113 1e-19
seq25 102 2e-16
>seq38
Length=1003587
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || || ||||| |||||||||||||||||||| | || |
Sbjct 149164 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCG 149105
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || ||||| ||||| || | |||||||| | | ||| |||||
Sbjct 149104 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTC 149045
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | |||| || ||| || || || ||
Sbjct 149044 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 148985
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097
|| || ||||| || |||||||| |||||||
Sbjct 148984 GATCGTCTTGCCTGTAAGAGTCTTGACGAAGA 148953
>seq24
Length=1584903
Score = 113 bits (124), Expect = 1e-19
Identities = 150/207 (72%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| |||||||||||||||||||| | || | ||||| || |
Sbjct 1347373 CAAG-TGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 1347431
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| || | |||||||| | | ||| |||||||| ||||| |
Sbjct 1347432 GCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGA 1347491
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | |||| || ||| || || || || || || ||||
Sbjct 1347492 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 1347551
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103
||||||| ||||| ||||||| ||||
Sbjct 1347552 CCGTGAGGGTCTTGACGAAGATTTGCA 1347578
>seq25
Length=1823320
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||||| || |||||||| ||||||||||| ||||| | || |
Sbjct 1053413 GAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCG 1053472
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || |||||||| | | ||||||||| | | || || ||
Sbjct 1053473 GCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTC 1053532
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | |||| ||| ||| || || || ||
Sbjct 1053533 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGT 1053592
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||| || ||||| || |||| |||||
Sbjct 1053593 GATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1053631
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || || || ||||| || ||||||||||| ||||| | || |
Sbjct 1054553 GAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCG 1054612
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| | | ||||||||| | | || || ||
Sbjct 1054613 GCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTC 1054672
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| || || ||||| | || | |||| ||| ||| || || || ||
Sbjct 1054673 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGT 1054732
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||| || ||||| || |||| |||||
Sbjct 1054733 GATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1054771
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || || || ||||| || |||||||||||||| || | || |
Sbjct 1054781 GAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACG 1054840
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | || ||||| | | || || ||
Sbjct 1054841 GCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 1054900
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||||| | || | |||| ||| ||| || || || ||
Sbjct 1054901 CTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGAAGACTCGACCTCGAGTGT 1054960
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || ||||| || |||| ||||||
Sbjct 1054961 GATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 1054999
Score = 84.2 bits (92), Expect = 5e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || || || ||||| || |||||||||||||| || | || |
Sbjct 1053641 GAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACG 1053700
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || ||||| || | || ||||| | | || || ||
Sbjct 1053701 GCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 1053760
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||||| | || | |||||||| ||| || || || ||
Sbjct 1053761 CTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGT 1053820
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || | ||||| || |||| |||||
Sbjct 1053821 GATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1053859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820179100182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |