Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015505.1_202016-12-
23] 42 sequences; 25,806,628 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq38 172 1e-37
seq24 163 7e-35
seq25 141 2e-28
>seq38
Length=1003587
Score = 172 bits (190), Expect = 1e-37
Identities = 162/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| ||||| || ||||||||||||||||| || || |||
Sbjct 148949 CAAATCTTCGTCAAGACTCTTACAGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 149008
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| ||||| ||||| || |||||||||
Sbjct 149009 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 149068
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| ||||| | || || |||||||| ||| ||
Sbjct 149069 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATC 149128
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 149129 CAAAAGGAGTCGACCCTCCA-CTTG 149152
>seq24
Length=1584903
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| || || || |||||||||||||| || || |||
Sbjct 1347576 CAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAC 1347517
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| ||||| ||||| || |||||||||
Sbjct 1347516 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 1347457
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| ||||| | || || |||||||| ||| ||
Sbjct 1347456 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATC 1347397
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 1347396 CAAAAGGAGTCGACGCTCCA-CTTG 1347373
>seq25
Length=1823320
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1293623 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1293564
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1293563 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1293504
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1293503 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1293444
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 1293443 CAGAAGGAGTCGACGCTGCA-CTTG 1293420
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1293851 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1293792
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1293791 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1293732
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1293731 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1293672
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1293671 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1293636
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1294535 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1294476
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1294475 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1294416
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1294415 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1294356
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1294355 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1294320
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1294991 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1294932
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1294931 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1294872
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1294871 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1294812
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1294811 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1294776
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1295219 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1295160
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1295159 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1295100
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1295099 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1295040
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1295039 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1295004
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1295447 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1295388
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1295387 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1295328
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1295327 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1295268
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1295267 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1295232
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1295675 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1295616
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1295615 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1295556
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1295555 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1295496
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1295495 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1295460
Score = 138 bits (152), Expect = 3e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1295903 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1295844
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1295843 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1295784
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1295783 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1295724
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 1295723 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1295688
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || || |||||||||||||| || || |||
Sbjct 1053628 CAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 1053569
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| || || || || || ||||||||
Sbjct 1053568 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 1053509
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1053508 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1053449
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || || || ||||
Sbjct 1053448 CAGAAAGAGTCGACCCTTCA-CTTG 1053425
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1294079 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1294020
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1294019 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1293960
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || ||||| ||||| | || || ||||| || ||| |
Sbjct 1293959 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1293900
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| || || || || || | || ||| | |||
Sbjct 1293899 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1293864
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1294307 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1294248
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1294247 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1294188
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || ||||| ||||| | || || ||||| || ||| |
Sbjct 1294187 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1294128
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| || || || || || | || ||| | |||
Sbjct 1294127 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1294092
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || |||||||| |||||||| || ||| |||
Sbjct 1294763 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1294704
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || || || || ||||| |||
Sbjct 1294703 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1294644
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || ||||| ||||| | || || ||||| || ||| |
Sbjct 1294643 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1294584
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| || || || || || | || ||| | |||
Sbjct 1294583 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1294548
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || || |||||||||||||| || || |||
Sbjct 1054768 CAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 1054709
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| || || || || || ||||||||
Sbjct 1054708 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 1054649
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | ||||| || || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 1054648 CGATTGATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1054589
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 1054588 CAGAAGGAGTCGACCCTCCA-CTTG 1054565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730552242148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |