Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq73 104 5e-17
>seq73
Length=1824528
Score = 104 bits (114), Expect = 5e-17
Identities = 294/442 (67%), Gaps = 16/442 (4%)
Strand=Plus/Plus
Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798
||||||||||| || | || || |||||||||||| ||||| | || |||||
Sbjct 1165602 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 1165661
Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856
||||| | ||| | | || ||| | ||| ||| ||||||| | | || ||||||
Sbjct 1165662 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 1165719
Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916
|| ||| || || || | | |||||||| || || || ||| ||||| || |
Sbjct 1165720 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 1165779
Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973
|||| | || ||| | ||||| | || ||||| ||||| ||||| ||||
Sbjct 1165780 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 1165836
Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033
| || || || |||||| || ||||| ||||||| |||||| ||||| ||| |
Sbjct 1165837 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGAATAGAGCGCACGT 1165896
Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092
||| | |||||| | || | ||||||| ||||| | | || |||| || |||
Sbjct 1165897 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 1165955
Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150
| | ||||||| || | | || || || | ||| || | ||| |||||||| |
Sbjct 1165956 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 1166013
Query 282151 CCTCGGCCCGAGTCTTGTTGAA 282172
|||||| ||||||||||
Sbjct 1166014 TGTCGGCCTTCTTCTTGTTGAA 1166035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822007654610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |