Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq60 98.7 7e-16 >seq60 Length=1146088 Score = 98.7 bits (108), Expect = 7e-16 Identities = 225/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||||||||| || || || || ||| | | | | | Sbjct 347551 TTCCAAGCACTCAAGATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 347610 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | || || || || ||||| || | |||||| || || | |||| |||| Sbjct 347611 TGCATCAACTGATCGACCCCTTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 347668 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | ||||||||||||||||| || ||||| || ||||| | ||| || || || || | Sbjct 347669 CGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCC 347728 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || |||| || || | ||| ||| ||||||||| |||||||||| | || || Sbjct 347729 CCAACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCT 347788 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 | || | ||| || || ||||||| | ||||| | |||||| || | | Sbjct 347789 TGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCGATGA 347848 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 ||||| | ||| || |||| || || ||||| || Sbjct 347849 TACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 347885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250552795897