Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq60 98.7 7e-16
>seq60
Length=1146088
Score = 98.7 bits (108), Expect = 7e-16
Identities = 225/337 (67%), Gaps = 4/337 (1%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||||||||| || || || || ||| | | | | |
Sbjct 347551 TTCCAAGCACTCAAGATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 347610
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044
|| | || || || || ||||| || | |||||| || || | |||| ||||
Sbjct 347611 TGCATCAACTGATCGACCCCTTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 347668
Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104
| ||||||||||||||||| || ||||| || ||||| | ||| || || || || |
Sbjct 347669 CGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCC 347728
Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164
|| |||| || || | ||| ||| ||||||||| |||||||||| | || ||
Sbjct 347729 CCAACCCAACCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCT 347788
Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
| || | ||| || || ||||||| | ||||| | |||||| || | |
Sbjct 347789 TGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCGATGA 347848
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261
||||| | ||| || |||| || || ||||| ||
Sbjct 347849 TACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 347885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250552795897
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |