Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12- 23] 147 sequences; 31,827,297 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq60 111 2e-19 >seq60 Length=1146088 Score = 111 bits (122), Expect = 2e-19 Identities = 188/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056 ||| || || || | |||| | ||||| ||||| |||| ||| | || ||||| | Sbjct 347619 CTGATCGACCCCTTCCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCGAAAT 347677 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 |||||||||||||||| || || || |||| ||||| ||||| ||||||| ||| Sbjct 347678 GCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCCCCAACCCAA 347737 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176 || | | || || | | || || || | ||||| |||||||| ||| | |||| | Sbjct 347738 CCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTCGGACA 347797 Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236 || || || || || || | | |||||| ||||| || |||| || || | | Sbjct 347798 ATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCGATGATACCTCGCG 347857 Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| |||||||||||| ||||||| Sbjct 347858 TAAAGACCTTCTTGGTGGTCAAAAGGGGGA 347887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075715733880