Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015965.1_202016-12-
23] 147 sequences; 31,827,297 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq60 111 2e-19
>seq60
Length=1146088
Score = 111 bits (122), Expect = 2e-19
Identities = 188/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056
||| || || || | |||| | ||||| ||||| |||| ||| | || ||||| |
Sbjct 347619 CTGATCGACCCCTTCCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCGAAAT 347677
Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116
|||||||||||||||| || || || |||| ||||| ||||| ||||||| |||
Sbjct 347678 GCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCCCCAACCCAA 347737
Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176
|| | | || || | | || || || | ||||| |||||||| ||| | |||| |
Sbjct 347738 CCTTGTCCAGAAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTCGGACA 347797
Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236
|| || || || || || | | |||||| ||||| || |||| || || | |
Sbjct 347798 ATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCGATGATACCTCGCG 347857
Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|||||| |||||||||||| |||||||
Sbjct 347858 TAAAGACCTTCTTGGTGGTCAAAAGGGGGA 347887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590075715733880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |